Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0609 |
Symbol | petB |
ID | 1168475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 634389 |
End bp | 635603 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637342600 |
Product | ubiquinol-cytochrome c reductase, cytochrome b |
Protein accession | NP_716242 |
Protein GI | 24372200 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAGA ATTTAATTAA TTGGATTGAT GCTCGCATCC CAATGACGGC GACGTATAAC CGCCACGTGG GTCAGTATGC TACGCCAACT AACTTTAACT TTTGGTACTT CTTCGGTTCG CTAGCAATGT TGGTATTGGT TAACCAATTA CTGACAGGTA TCTGGTTAAC CATGAACTAT GTACCAACCG CAGAAGGCGC TTTTGCTTCT GTTGAATACA TCATGCGTGA CGTAGAGTAC GGCTGGTTAT TGCGTTATAT GCACTCCACC GGCGCTTCTG CTTTCTTCGT GGTGATCTAC TTACATATGT TCCGTGGTCT GATTTACGGT TCATATCAAA AGCCTAGAGA ACTGCTGTGG TTATTCGGTA TGTTGATTTT CCTCGTACTG ATGGCTGAAG CCTTTATGGG CTACTTGCTG CCATGGGGAC AAATGTCTTA CTGGGGCGCA CAGGTAATTA TTTCTCTGTT CGGTGCAATC CCTGTTATTG GTGATGACTT AACCCTCTGG ATCCGTGGTG ACTACGTGAT CTCTGGCGCA ACGCTGAACC GTTTCTTTGC ATTGCATGTT ATCGCACTGC CATTAGTGTT AGTGGTATTA GTGTTCTTAC ACTTAATCGC TCTGCACGAA GTGGGTTCAA ACAACCCAGA TGGTATCGAA ATCAAGAAGA ACAAAGACGA AAATGGTTGG CCAGTTGATG GCATTCCATT CCACCCATAT TACACAGTTA AAGATATTAT GGGCGTTGCG GGCTTCCTGA TTGTGTTCTG TTACGTACTG TTCTTCATCC CTGAAGGCGG TGGTTACTTC CTTGAGAAGC CAAACTTTGA AGCGGCTAAC CCAATGAAGA CACCAGAGCA TATTGCGCCA GTATGGTACT TCACTCCTTT CTACGCCATC TTACGTGCTG TTCCGGATAA ATTGGGTGGC GTAATTATGA TGGGGCTGTC GATTGGTGTA CTGTTTGTGT TGCCTTGGCT CGATCGCTGT AAAGTGAAGT CCGTTCGTTA CCGTAGTACG CTGCATAAGT TAAATATTGC TCAATTTGCA GTATCTTTCA TTGTGTTAGG TTACTTAGGC GTCGTTCCTG CTTCACCAAC ACTGACGATC GTTGCGCAGG TATTTACTTT TACTTACTTT GGCTTCTTTG TGGCGCTGTG GGTATACAGC AAGAATGAAA AAACTAAACC TGTTCCAGCG AGGTTAACAC ACTAA
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Protein sequence | MVKNLINWID ARIPMTATYN RHVGQYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY VPTAEGAFAS VEYIMRDVEY GWLLRYMHST GASAFFVVIY LHMFRGLIYG SYQKPRELLW LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDYVISGA TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PVDGIPFHPY YTVKDIMGVA GFLIVFCYVL FFIPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI LRAVPDKLGG VIMMGLSIGV LFVLPWLDRC KVKSVRYRST LHKLNIAQFA VSFIVLGYLG VVPASPTLTI VAQVFTFTYF GFFVALWVYS KNEKTKPVPA RLTH
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