Gene SO_0608 details

Gene Information

• Locus tag: SO_0608
• Symbol: petA
• ID: 1168474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 633799
• End bp: 634389
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637342599
• Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit
• Protein accession: NP_716241
• Protein GI: 24372199
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTCC TGACAGCCGC AACCGCCGTA 
GTAGGTGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTCA TCAAGTCGTG GAATCCGAGT 
GCCAAGGCGA AAGCTGCAGG TGCACCGGTC GAAGTAAATA TCAGTAAAGT AGAGCCAGGT 
CAGCTGATCC GTGTTGAGTG GCGAGGAAAA CCTGTATGGG TTGTTCGTCG CACAGAAGCC 
GTGATCAATG AACTGCCAAC ACACGATGCT CAATTAAGAG ATCCAGCTTC TGCCGAAATG 
CAGCAGCCTG AATATGCAAC TAATCCTCTG CGCTCAATTA AGCCAGAGTA TTTTATTGCC 
GTCGGTATTT GTACCCACCT AGGATGTTCA CCCACTTATT TGCCAGATTC ATTTGCTGAG 
CAAGTTCAAG GTGTGACTTC TGGTTTCTTC TGCCCATGTC ATGGTTCTAA GTTCGATATG 
GCGGGCCGCG TGTTCCAAGG CGTTCCAGCT CCATTGAACC TAGTTATCCC TCCACATCAA 
TATGTTGATG ATGGCACCGT TATCATCGGT GTAGATAAAG GAGTGGCGTA A 

 

Protein sequence

MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG 
QLIRVEWRGK PVWVVRRTEA VINELPTHDA QLRDPASAEM QQPEYATNPL RSIKPEYFIA 
VGICTHLGCS PTYLPDSFAE QVQGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ 
YVDDGTVIIG VDKGVA