Gene SO_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0603 
Symbolhfq 
ID1168470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp629756 
End bp630028 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content46% 
IMG OID637342595 
Producthost factor-I protein 
Protein accessionNP_716236 
Protein GI24372194 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CACTACGCCG CGAGCGCGTT 
CCAGTATCAA TTTACTTGGT AAACGGCATT AAACTCCAAG GACAGGTAGA GTCGTTTGAT
CAATTTGTCA TTCTGTTGAA AAACACAGTG AGCCAAATGG TTTACAAACA CGCTATTTCT
ACTGTTGTTC CTGCTCGCCC ATTTAACGTT GCTGGTCACC AAAATGCCCA GGGCGGTTAC
GGTGCGCAAG ACGATATGCC AAGTGGCGAA TAA
 
Protein sequence
MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS 
TVVPARPFNV AGHQNAQGGY GAQDDMPSGE