Gene SO_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0600 
SymbolamiB 
ID1168467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp625445 
End bp626836 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content45% 
IMG OID637342592 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionNP_716233 
Protein GI24372191 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA ATAAGCATTA CTTTCAAGGT ATTATTCTTT TACTGTGCAC ATTTTTTGCT 
GTGGCGGCCC AAGCGGCAAA CCAGCTCGAA AGTGTGCGCA TTTGGGCTGC ACCCGAGTCG
ACGCGAATCG TGTTCGATTT GAGCGAAGTA CCCAATTACA GCTACTTTAC CCTCGATGGA
CCTAATCGTT TAGTGGTCGA CCTAAAAAAG GCATCGACGA AACTGAATCT GAAAAATGTT
GATAACAACA GTAAGTTAGT TAAAGGGATT CGGGTCAGTA AATCCCCCAC GAAAGGGGAT
TTACGACTGG TTATCGATTT GGTTAAGCCA TTAAATCCAA ATTTGTTTTC GCTGCCCGTG
ACGGCACCTT ATGGCAATCG TCTAGTGGTC GACTTAGAGG ATAAAAGCGC CACTGCAGAG
CTATCGGCCG TGAGTTCAAC TCCAGTCAAA AAAAATGTGA CTCAAAGCGT TCAAGCTTCT
CGAGATATTG TGATTGCTAT TGATGCTGGA CATGGTGGTG ACGATCCGGG GTCGATTGGG
CCATCTGGTC TCTATGAGAA AAAAGTAGTA TTTGAAATTT CAAAGCGCCT TGCCAGTAAA
ATTAACGACA CCCCAGGAAT GCGTGCCGTG ATGATCCGTA GTGGTGACTA CTTTGTTAAC
TTAAACCGGC GCTCTGAGCT TGCCCGCAAT AGTAAGGCCG ACCTACTGAT TTCTATCCAT
GCGGATGCTT TCACATCGCC CAATCCTCGC GGGGCGTCCG TGTGGGTATT ATCGATGCGC
CGTGCAAACA GTGAAATTGG TCGTTGGTTA GAGCAAAAAG AGAAACACTC AGAATTGTTG
GGTGGTGCAG GGGAAATTAT TCAAAATACT GATAATGAAC AGTATCTTGC AATGACCTTA
CTCGATATGT CGATGAACAG CTCTATGGCC ATTGGTCACT CGGTTGCTGG GGATATTTTA
AAAGATTTAG GTGCTGTGAC TGAGCTGCAT AAGAGCCGCC CAGAATCGGC AAGTTTTGCG
GTATTGAAAT CCCCTGATAT TCCTTCAATT CTAGTGGAAA CAGGGTTTAT CTCGAATCCT
AAGGAAGAGC GTTTGCTGAG CAGCAGCCGT CATCAAGAAA GCATTGCCAC CGCAATTTAT
AAGGGTGTTA ACCGTTATTT CCATAATAAT CCGCCAGCAG ATACGCTATT AGCGAAGAAA
AATACCACTG GCTCAACTGT TAAATCCAGT AGCAAATCTG CTGGTACCAT CAAACATAAG
GTGAGCCGCG GTGAGTCGCT TTCTGCAATA GCCCAGCGTT ATAAAGTCCC TATGGCCAGT
ATTATTCGCG CCAATGGCAT GAAGACCGAT GTTGTTCAGC TTGGGCAAAC ACTCGTGATT
CCTGAGAGTT AA
 
Protein sequence
MTKNKHYFQG IILLLCTFFA VAAQAANQLE SVRIWAAPES TRIVFDLSEV PNYSYFTLDG 
PNRLVVDLKK ASTKLNLKNV DNNSKLVKGI RVSKSPTKGD LRLVIDLVKP LNPNLFSLPV
TAPYGNRLVV DLEDKSATAE LSAVSSTPVK KNVTQSVQAS RDIVIAIDAG HGGDDPGSIG
PSGLYEKKVV FEISKRLASK INDTPGMRAV MIRSGDYFVN LNRRSELARN SKADLLISIH
ADAFTSPNPR GASVWVLSMR RANSEIGRWL EQKEKHSELL GGAGEIIQNT DNEQYLAMTL
LDMSMNSSMA IGHSVAGDIL KDLGAVTELH KSRPESASFA VLKSPDIPSI LVETGFISNP
KEERLLSSSR HQESIATAIY KGVNRYFHNN PPADTLLAKK NTTGSTVKSS SKSAGTIKHK
VSRGESLSAI AQRYKVPMAS IIRANGMKTD VVQLGQTLVI PES