| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0600 |
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| Symbol | amiB |
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| ID | 1168467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 625445 |
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| End bp | 626836 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637342592 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | NP_716233 |
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| Protein GI | 24372191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA ATAAGCATTA CTTTCAAGGT ATTATTCTTT TACTGTGCAC ATTTTTTGCT
GTGGCGGCCC AAGCGGCAAA CCAGCTCGAA AGTGTGCGCA TTTGGGCTGC ACCCGAGTCG
ACGCGAATCG TGTTCGATTT GAGCGAAGTA CCCAATTACA GCTACTTTAC CCTCGATGGA
CCTAATCGTT TAGTGGTCGA CCTAAAAAAG GCATCGACGA AACTGAATCT GAAAAATGTT
GATAACAACA GTAAGTTAGT TAAAGGGATT CGGGTCAGTA AATCCCCCAC GAAAGGGGAT
TTACGACTGG TTATCGATTT GGTTAAGCCA TTAAATCCAA ATTTGTTTTC GCTGCCCGTG
ACGGCACCTT ATGGCAATCG TCTAGTGGTC GACTTAGAGG ATAAAAGCGC CACTGCAGAG
CTATCGGCCG TGAGTTCAAC TCCAGTCAAA AAAAATGTGA CTCAAAGCGT TCAAGCTTCT
CGAGATATTG TGATTGCTAT TGATGCTGGA CATGGTGGTG ACGATCCGGG GTCGATTGGG
CCATCTGGTC TCTATGAGAA AAAAGTAGTA TTTGAAATTT CAAAGCGCCT TGCCAGTAAA
ATTAACGACA CCCCAGGAAT GCGTGCCGTG ATGATCCGTA GTGGTGACTA CTTTGTTAAC
TTAAACCGGC GCTCTGAGCT TGCCCGCAAT AGTAAGGCCG ACCTACTGAT TTCTATCCAT
GCGGATGCTT TCACATCGCC CAATCCTCGC GGGGCGTCCG TGTGGGTATT ATCGATGCGC
CGTGCAAACA GTGAAATTGG TCGTTGGTTA GAGCAAAAAG AGAAACACTC AGAATTGTTG
GGTGGTGCAG GGGAAATTAT TCAAAATACT GATAATGAAC AGTATCTTGC AATGACCTTA
CTCGATATGT CGATGAACAG CTCTATGGCC ATTGGTCACT CGGTTGCTGG GGATATTTTA
AAAGATTTAG GTGCTGTGAC TGAGCTGCAT AAGAGCCGCC CAGAATCGGC AAGTTTTGCG
GTATTGAAAT CCCCTGATAT TCCTTCAATT CTAGTGGAAA CAGGGTTTAT CTCGAATCCT
AAGGAAGAGC GTTTGCTGAG CAGCAGCCGT CATCAAGAAA GCATTGCCAC CGCAATTTAT
AAGGGTGTTA ACCGTTATTT CCATAATAAT CCGCCAGCAG ATACGCTATT AGCGAAGAAA
AATACCACTG GCTCAACTGT TAAATCCAGT AGCAAATCTG CTGGTACCAT CAAACATAAG
GTGAGCCGCG GTGAGTCGCT TTCTGCAATA GCCCAGCGTT ATAAAGTCCC TATGGCCAGT
ATTATTCGCG CCAATGGCAT GAAGACCGAT GTTGTTCAGC TTGGGCAAAC ACTCGTGATT
CCTGAGAGTT AA
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| Protein sequence | MTKNKHYFQG IILLLCTFFA VAAQAANQLE SVRIWAAPES TRIVFDLSEV PNYSYFTLDG
PNRLVVDLKK ASTKLNLKNV DNNSKLVKGI RVSKSPTKGD LRLVIDLVKP LNPNLFSLPV
TAPYGNRLVV DLEDKSATAE LSAVSSTPVK KNVTQSVQAS RDIVIAIDAG HGGDDPGSIG
PSGLYEKKVV FEISKRLASK INDTPGMRAV MIRSGDYFVN LNRRSELARN SKADLLISIH
ADAFTSPNPR GASVWVLSMR RANSEIGRWL EQKEKHSELL GGAGEIIQNT DNEQYLAMTL
LDMSMNSSMA IGHSVAGDIL KDLGAVTELH KSRPESASFA VLKSPDIPSI LVETGFISNP
KEERLLSSSR HQESIATAIY KGVNRYFHNN PPADTLLAKK NTTGSTVKSS SKSAGTIKHK
VSRGESLSAI AQRYKVPMAS IIRANGMKTD VVQLGQTLVI PES
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