Gene SO_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0592 
Symbolorn 
ID1168461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp619424 
End bp619969 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID637342582 
Productoligoribonuclease 
Protein accessionNP_716225 
Protein GI24372183 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAG ACGCAAATAA TCTCATTTGG ATCGATCTTG AAATGACTGG GTTAGAACCC 
GATGTGGATA GAGTCATTGA AATTGCTACC TTAGTAACGG ACCAAGAACT CAATATTATC 
GGTCAGGGAC CTGTGATTGC GATTCACCAA TCGGATGAAG TATTAGCGGC TATGGATGAT 
TGGAACCAAA AACACCATGG TGAATCGGGA CTGATTGAGA GAGTCCGCGC CAGCCAAGTG 
AACGAAGCAG AGGCTGTTGC TCAAACTATT GCTTTCTTAG CGCAATACGT ACCTAAGGGC 
GTCTCACCAA TGTGCGGTAA CAGCGTGGGC CAAGACCGTC GCTTTTTAAA CCGCTACATG 
CGCGAGCTGG AGGATTACTT CCATTACCGC AACCTCGACG TAAGCACGGT TAAAGAGTTA 
GTGAAGCGTT GGAGCCCTGA AACCATGGCG GGTTTCAAAA AGCAAAACAC TCACCAAGCT 
TTGCAAGATA TCCAAGAGTC GATAGCAGAA TTGCAGTATT ACCGTAGCAA AGTATTTAAA 
ATTTGA
 
Protein sequence
MAADANNLIW IDLEMTGLEP DVDRVIEIAT LVTDQELNII GQGPVIAIHQ SDEVLAAMDD 
WNQKHHGESG LIERVRASQV NEAEAVAQTI AFLAQYVPKG VSPMCGNSVG QDRRFLNRYM 
RELEDYFHYR NLDVSTVKEL VKRWSPETMA GFKKQNTHQA LQDIQESIAE LQYYRSKVFK 
I