| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0588 |
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| Symbol | |
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| ID | 1168455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 613120 |
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| End bp | 616323 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342578 |
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| Product | transporter, putative |
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| Protein accession | NP_716223 |
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| Protein GI | 24372181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAG TGAAAATTGC GTTGCAGTAC ATGCTGCCAA AGCACCTGTT ATCTCGCTTA
GTCGGTAAAC TTGCCGCGTC TGAAGCTGGC GCATTAACGA CTGCCGCGAT TAAATGGTTT
ATCAAGCAAT TATAA
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| Protein sequence | MPRILLFVIA FFSFSLHANS PLQLDKRLGL NNQNQQQNIS IDDQITELKN NIDRLAANAS
SFQQAQLDFE KNKKVINQGL KEAAVQLKLD KGTDLNQQAS MAYLRLSELK ESETALGNQV
NELLQRHNLL PSVIANARQN VLQNKKTELA PIDTPTGELQ QTQRIFFEQS LATHEAELAS
SQKRIELTQL QLQLVRQQLS QQEAFIETIN KVINKQRQRQ TDATLAKNLV DTAKVVDPVT
RNIADTNQIY GQKLQTLTLQ INNVVEQQEQ AELQYQSQAK QLANIQEQIT WVKMNSAFGE
RFLQMLQSLP KPPNHEKLQT LIADARLDRY HLEQQQALNE QELEQTNRYS EGQIKLLRSQ
QALLTQLMQS YDQYLSELGK LKVNYQQLSQ QHLTLKNTLN EHLFWVPNAA SINKLWLTDV
QRSALWLIQE AQWGQLGKAW QEQNDYWSWW IILLVLCLVI QDLIKPKFNR LLGHYATYVG
NVTQDKFIYT FKSLALSLGY ALIKPLPIVA AGWIFYQSDR NFVQAVGMGI LAIGLVYLLY
RLIFILALDK GVLVGHFKRP SKLIQAGQLR LKHFVFVASP LLGIMGFTEI LDASLIRNSI
GRGAFICFCV ILFLLYKDVL LLSRQNTDTK KDGKNKRLIQ KMLWALLISV PLLSAVLAFR
GYYFTAFQML LQLQLSIVLG LSFLLLYQLI KRWMLIERRR IAFDRAKAKR AERLAQREKG
ETHHASNDGL DTYEEPVVDL ETISSQSLGL VRSLLLLAFL ASLIGLWTQT HTALFSFLDG
ITLWTTNTSI NGVEQQLPIT MKSLLFGLII VGFSLMIATN LPGLLELMIL QRLDLTPGTG
FAITTVSRYL VVFLGLLIGF SNLGMEWSKL QWLIAALSLG LGFGLQEIFA NFISGLIILF
EKPVRIGDTV TIRDLTGTVS KIQIRATTII DWDRKEIIIP NKAFITEQLI NWSLSDPITR
VIVHVSVARD SDPAKVEATL YQAVQECEDA LANPEPEVWF AGFGKHTQDY EVRAYAKDMS
ARWPLRHDLH KRITRKLKEN NLELAYPQME IHLKNGQNRD QVGIIRS
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