Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0587 |
Symbol | |
ID | 1168454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 612382 |
End bp | 613104 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342577 |
Product | glycerophosphoryl diester phosphodiesterase, putative |
Protein accession | NP_716222 |
Protein GI | 24372180 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTT TTGCTCACCG CGGTGCCAGC GGTTATGTGG CCGAAAATAC CTTAGCCGCC ATGGCCAAAG CGATTGAATT AGGCGCCAAA GCCATTGAGC TGGATGTGCA TAATGTCGAA GGTGAGCTAG TGGTATTTCA TGACCGTAGA CTCGACAGTA AAAGCTCAGG CACAGGAATA ATCCATTTAG TCAGCCAAGA CTATCTTGCC AATGTCACCG TCAAAGGCGA ATCCATCTCC ACGCTTTGGC AAGTGCTTGA GCTTGTTGCT GGCCGCGCCA CGGTAAACAT TGAACTTAAG GGGATTAATA CGGTAGCGCC ACTATTCAAA CTTTACCCCA AAGCCATTGC AGAGCTGGGA TTCAGTGCTG AGCAATTACT GATTTCCTCC TTCAATCACC CTTATTTACA GCAAGTCAAA CAGGCTCTGC CACAGGCATT AGTGGCACCT TTGCTCGCCA GTATTCCCCT CGATGGCGCA GCGGTCGTGA GCGAGCTAAA CGCATATTCT CTGCATCTAG ATGTGAGTTT TATTAGCAAA GTGCTAGTAG ATGATGCCCA CCGAAGAGGC GCTAAGGTTT ATGTTTACAC CGTCGATCAC AGCGATGATA TTCACGCACT TAAGCAGCTT GGCGTTGATG GCATCTTTAG CAACTACCCC GACCGTGCGA TGCAAGCACT ATTACAACCG ACCACTACGG ATTATCGCGG TTATTTCGAA TAA
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Protein sequence | MLIFAHRGAS GYVAENTLAA MAKAIELGAK AIELDVHNVE GELVVFHDRR LDSKSSGTGI IHLVSQDYLA NVTVKGESIS TLWQVLELVA GRATVNIELK GINTVAPLFK LYPKAIAELG FSAEQLLISS FNHPYLQQVK QALPQALVAP LLASIPLDGA AVVSELNAYS LHLDVSFISK VLVDDAHRRG AKVYVYTVDH SDDIHALKQL GVDGIFSNYP DRAMQALLQP TTTDYRGYFE
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