Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0565 |
Symbol | |
ID | 1168435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 586522 |
End bp | 587403 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342558 |
Product | adhesion protein, putative |
Protein accession | NP_716200 |
Protein GI | 24372158 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCGCCG CGGCCCTATC GTTTGCTTGT TCAGGCTTTG CTCACGCTGA GCTAAATGTG TTTGCCTGCG AACCTGAATA TGCTGCATTG GCAAAAGAGT TGGCACCTAA CGCCAGCATT TATTCAGCCA CCACGGCCTT ACAAGATCCG CATCAAGTGC AGGCCCGTCC GAGCTTGATC GCCAAAATGC GTCAAGCGGA TCTGGTGGTG TGTGCGGGGG CCGATTTAGA AATCGGCTGG TTGCCTATGT TACAGATGAA GTCCGCTAAC GCTAAGGTAC ATTCGACCGA GCAAGGCTTG TTTTTTGCCG CCGAGCAAAT CGATACCTTA GACAAATTGG CTAGTGTGGA TCGCAGTATG GGTGATGTGC ATGCTAAGGG AAATCCACAC ATTCATTTCG ATCCTAATCG GGTGTTAACA GTGGCCAAAG CCTTAACTGC TAAGATGAGC CAATTGGAAC CGAGTGAAGC TGCGAATTAT CAAAAGTCGT TAGCGGACTT CAGTTCTCGT TGGCAAGCAG CTATCCCCCG TTGGGAAGAA CAAGCCAAGC CGTTAAAAGG TAAAAAAGTG ATCGCCTATC ACACCAGTTT TAGATACCTA TTTAACTGGT TGGGTATAGA ACAAGTGGCT GATCTTGAAC CTAAACCTGG TTTAGCACCC ACCAGTGGCC ATTTAGCGAG TTTGCTAAGC CGCGCCGAAC AAGGTGATAT TTTTGCTGTA GTGGTGGCTT CTTATCAGGA TGAACGTGGT GCTAAGTGGT TGGGTGAAAA GGCGAATCTT CCCGTCGTGA TGTTACCTAT GTCTGTCGGT GGAAATGATA ATAGTCAAGA TCTCTTTAGC CTCTATGACA GTGCGATTTC CCTCTTAAAT GGGGTGAAAT AG
|
Protein sequence | MAAAALSFAC SGFAHAELNV FACEPEYAAL AKELAPNASI YSATTALQDP HQVQARPSLI AKMRQADLVV CAGADLEIGW LPMLQMKSAN AKVHSTEQGL FFAAEQIDTL DKLASVDRSM GDVHAKGNPH IHFDPNRVLT VAKALTAKMS QLEPSEAANY QKSLADFSSR WQAAIPRWEE QAKPLKGKKV IAYHTSFRYL FNWLGIEQVA DLEPKPGLAP TSGHLASLLS RAEQGDIFAV VVASYQDERG AKWLGEKANL PVVMLPMSVG GNDNSQDLFS LYDSAISLLN GVK
|
| |