Gene SO_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0565 
Symbol 
ID1168435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp586522 
End bp587403 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content48% 
IMG OID637342558 
Productadhesion protein, putative 
Protein accessionNP_716200 
Protein GI24372158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCCG CGGCCCTATC GTTTGCTTGT TCAGGCTTTG CTCACGCTGA GCTAAATGTG 
TTTGCCTGCG AACCTGAATA TGCTGCATTG GCAAAAGAGT TGGCACCTAA CGCCAGCATT
TATTCAGCCA CCACGGCCTT ACAAGATCCG CATCAAGTGC AGGCCCGTCC GAGCTTGATC
GCCAAAATGC GTCAAGCGGA TCTGGTGGTG TGTGCGGGGG CCGATTTAGA AATCGGCTGG
TTGCCTATGT TACAGATGAA GTCCGCTAAC GCTAAGGTAC ATTCGACCGA GCAAGGCTTG
TTTTTTGCCG CCGAGCAAAT CGATACCTTA GACAAATTGG CTAGTGTGGA TCGCAGTATG
GGTGATGTGC ATGCTAAGGG AAATCCACAC ATTCATTTCG ATCCTAATCG GGTGTTAACA
GTGGCCAAAG CCTTAACTGC TAAGATGAGC CAATTGGAAC CGAGTGAAGC TGCGAATTAT
CAAAAGTCGT TAGCGGACTT CAGTTCTCGT TGGCAAGCAG CTATCCCCCG TTGGGAAGAA
CAAGCCAAGC CGTTAAAAGG TAAAAAAGTG ATCGCCTATC ACACCAGTTT TAGATACCTA
TTTAACTGGT TGGGTATAGA ACAAGTGGCT GATCTTGAAC CTAAACCTGG TTTAGCACCC
ACCAGTGGCC ATTTAGCGAG TTTGCTAAGC CGCGCCGAAC AAGGTGATAT TTTTGCTGTA
GTGGTGGCTT CTTATCAGGA TGAACGTGGT GCTAAGTGGT TGGGTGAAAA GGCGAATCTT
CCCGTCGTGA TGTTACCTAT GTCTGTCGGT GGAAATGATA ATAGTCAAGA TCTCTTTAGC
CTCTATGACA GTGCGATTTC CCTCTTAAAT GGGGTGAAAT AG
 
Protein sequence
MAAAALSFAC SGFAHAELNV FACEPEYAAL AKELAPNASI YSATTALQDP HQVQARPSLI 
AKMRQADLVV CAGADLEIGW LPMLQMKSAN AKVHSTEQGL FFAAEQIDTL DKLASVDRSM
GDVHAKGNPH IHFDPNRVLT VAKALTAKMS QLEPSEAANY QKSLADFSSR WQAAIPRWEE
QAKPLKGKKV IAYHTSFRYL FNWLGIEQVA DLEPKPGLAP TSGHLASLLS RAEQGDIFAV
VVASYQDERG AKWLGEKANL PVVMLPMSVG GNDNSQDLFS LYDSAISLLN GVK