Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0560 |
Symbol | fhs |
ID | 1168429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 580495 |
End bp | 582207 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637342553 |
Product | formate--tetrahydrofolate ligase |
Protein accession | NP_716196 |
Protein GI | 24372154 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCT CACTGATATT ACTACTCGCC CTAAGCTTTC CCCTGCTGAT AAATGCCAAA GTATTCGCTG CAGATCCAGT CCCCGTCACG ACCACTCAAA CCACTTCGGT TTCAAACGAT ACTGAAGCTG AATTAACGAC GCTACAAACT GCCATTAAAG AAGATATTGC GCGCTTAGCT CACTACCAAG GTGAATTGCG CACGATTGCT GAATATCGCA TTCAAAATAA GTCCTTACAG TTACGTAATA AGATTAAAAC ACTTTTAGAC GATGACAGTT ACGACAAAGC CTTAATATTA CCCCTCGTTC AAGAGCAATT GCTTTTTAAT CAGAAAATTA ACGACTACTT TAATGATATC GTCAGCAAAT TATCCCAGAA ACTCGGTACA CCGGATGATG AGGCTACCTT ACTTGAGATC TCAAAGCGTG AACTCGACAA AGACAATAAT TACAAGCAAC GACTTGAGAC CCTAGACTGG CTGAGTCAGC TTGGCCAAGA TGTGACGGCA GAAAAAGCAC AGCTCACCCA AATCCTGCTT AGCCGTGCAG ATAACTTTGA TAGCTTTGTC ACTTATACCC AGCAACAATT ACAAAATGCG GTGAATGACG CCACCAATGC AGGGAAAGAT GCTACCTCAG CGCAAACCAG TCGTGTGATA CAACTAAAAG ACCGTTTGGC GCAAAATAGC CTTAGCCTCA GCATAGATAT CGAACTACTT GATGCACTAG GGCAAAACAC CGCCATGCTG AAAAAGACTT TGTTTAGCAT CTCCGGTGAT ATTACGCAGG ATGTGTTAAG CGTTGATGTG GCATCGAGCT TAATCAAGCA ATGGCTAAAT ACTGCTAAAG ATCAAGCCAT TAACCACGGG CCTACCTTAG TCTTTAAATT ATTTATCTTC TGTCTGATCC TATTTGTCGC TAGCCTTGTG GGCAAACTGG TGAAAAAGAT AGTGAGTAAT ACAGTTAGCA ATTCTAAGTT AAATTTCAGT AAGTTACTGC AAGACTTTTT TACATCACTC TCGGGTAAGG CTGTATTTAC TATCGGTTTG CTGATTGCTT TATCCCAGCT TGGTATCGAA CTAGGCCCCC TGCTGGCAGG TTTTGGTATT GCCGGTGTGA TCATCGGTTT TGCCCTGCAA GACACCCTTT CCAACTTTGC TTCAGGCATG ATGATTTTAA TCTATCGCCC CTACGATGTC GGCGATTTGA TTAATGCAGC GGGCGTGTCG GGGCGCGTTA GCCATATGAG CCTAGTCTCT ACAACCATTA AAACACTAGA TAATCAATGA
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Protein sequence | MLTDMEISRR AHLKDIAQLG AEFGLLPEEM QLFGNTKAKV DLQVQQRLAG QPKGKLIIVT AVTPTPHGEG KTVTTIGLTQ SLKALGNKVC ACIRQPSMGP VFGVKGGAAG GGYAQVVPMQ ELNLHLTGDI HAVSSAHNLG AAAIASRLYH EMRLGKAEFE RQSGLSYLDI DPKGIRWHRV VDHNDRCLRE IEVGLGENNG PAYTSGFDIT AASELMAILA LSRNLTDMRV RIGKLVLALN RQGEAVSADE LGVAGAMTAI MADAVKPTLM QTLNGAPCLI HAGPFANIAH GNSSVIADDI ALKLADFVVT EGGFGSDMGF EKFCNIKARQ SGLIPSAAVL VTTLKALKAN SGLASDTDIN APDQARLEAG FANLNWHINN VVQYGLPVVV AINRFASDTD AELNWLMEAV RGTAAFGCEL SEAFSQGEDG AMALAQTVIR ACEQPSEFRL LYPDNMELEA KLSTLAELGY GAAGINLSAV AKQQLQELSA LGYAHLPVCM AKTPLSISHD PQLKGVPQGF IVPVRELVLN AGAGFITALV GNVMTMPGLG LTPGYLKIDI DVDGEIIGLG
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