Gene SO_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0560 
Symbolfhs 
ID1168429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp580495 
End bp582207 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content43% 
IMG OID637342553 
Productformate--tetrahydrofolate ligase 
Protein accessionNP_716196 
Protein GI24372154 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCT CACTGATATT ACTACTCGCC CTAAGCTTTC CCCTGCTGAT AAATGCCAAA 
GTATTCGCTG CAGATCCAGT CCCCGTCACG ACCACTCAAA CCACTTCGGT TTCAAACGAT
ACTGAAGCTG AATTAACGAC GCTACAAACT GCCATTAAAG AAGATATTGC GCGCTTAGCT
CACTACCAAG GTGAATTGCG CACGATTGCT GAATATCGCA TTCAAAATAA GTCCTTACAG
TTACGTAATA AGATTAAAAC ACTTTTAGAC GATGACAGTT ACGACAAAGC CTTAATATTA
CCCCTCGTTC AAGAGCAATT GCTTTTTAAT CAGAAAATTA ACGACTACTT TAATGATATC
GTCAGCAAAT TATCCCAGAA ACTCGGTACA CCGGATGATG AGGCTACCTT ACTTGAGATC
TCAAAGCGTG AACTCGACAA AGACAATAAT TACAAGCAAC GACTTGAGAC CCTAGACTGG
CTGAGTCAGC TTGGCCAAGA TGTGACGGCA GAAAAAGCAC AGCTCACCCA AATCCTGCTT
AGCCGTGCAG ATAACTTTGA TAGCTTTGTC ACTTATACCC AGCAACAATT ACAAAATGCG
GTGAATGACG CCACCAATGC AGGGAAAGAT GCTACCTCAG CGCAAACCAG TCGTGTGATA
CAACTAAAAG ACCGTTTGGC GCAAAATAGC CTTAGCCTCA GCATAGATAT CGAACTACTT
GATGCACTAG GGCAAAACAC CGCCATGCTG AAAAAGACTT TGTTTAGCAT CTCCGGTGAT
ATTACGCAGG ATGTGTTAAG CGTTGATGTG GCATCGAGCT TAATCAAGCA ATGGCTAAAT
ACTGCTAAAG ATCAAGCCAT TAACCACGGG CCTACCTTAG TCTTTAAATT ATTTATCTTC
TGTCTGATCC TATTTGTCGC TAGCCTTGTG GGCAAACTGG TGAAAAAGAT AGTGAGTAAT
ACAGTTAGCA ATTCTAAGTT AAATTTCAGT AAGTTACTGC AAGACTTTTT TACATCACTC
TCGGGTAAGG CTGTATTTAC TATCGGTTTG CTGATTGCTT TATCCCAGCT TGGTATCGAA
CTAGGCCCCC TGCTGGCAGG TTTTGGTATT GCCGGTGTGA TCATCGGTTT TGCCCTGCAA
GACACCCTTT CCAACTTTGC TTCAGGCATG ATGATTTTAA TCTATCGCCC CTACGATGTC
GGCGATTTGA TTAATGCAGC GGGCGTGTCG GGGCGCGTTA GCCATATGAG CCTAGTCTCT
ACAACCATTA AAACACTAGA TAATCAATGA
 
Protein sequence
MLTDMEISRR AHLKDIAQLG AEFGLLPEEM QLFGNTKAKV DLQVQQRLAG QPKGKLIIVT 
AVTPTPHGEG KTVTTIGLTQ SLKALGNKVC ACIRQPSMGP VFGVKGGAAG GGYAQVVPMQ
ELNLHLTGDI HAVSSAHNLG AAAIASRLYH EMRLGKAEFE RQSGLSYLDI DPKGIRWHRV
VDHNDRCLRE IEVGLGENNG PAYTSGFDIT AASELMAILA LSRNLTDMRV RIGKLVLALN
RQGEAVSADE LGVAGAMTAI MADAVKPTLM QTLNGAPCLI HAGPFANIAH GNSSVIADDI
ALKLADFVVT EGGFGSDMGF EKFCNIKARQ SGLIPSAAVL VTTLKALKAN SGLASDTDIN
APDQARLEAG FANLNWHINN VVQYGLPVVV AINRFASDTD AELNWLMEAV RGTAAFGCEL
SEAFSQGEDG AMALAQTVIR ACEQPSEFRL LYPDNMELEA KLSTLAELGY GAAGINLSAV
AKQQLQELSA LGYAHLPVCM AKTPLSISHD PQLKGVPQGF IVPVRELVLN AGAGFITALV
GNVMTMPGLG LTPGYLKIDI DVDGEIIGLG