| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0558 |
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| Symbol | smtA |
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| ID | 1168427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 578052 |
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| End bp | 578834 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342551 |
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| Product | smtA protein |
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| Protein accession | NP_716194 |
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| Protein GI | 24372152 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAAGATA AAAATTTCGA TAAACTCGCG CAAAAATTTG CGAAGAACAT TTATGGCACC
CCTAAAGGTG AAATCCGTGC CGCCGTGCTC TGGCGCGATC TCGCTCCCGC ATTGGCACAG
TTTGGCGATA AAAAGCTACG GATTTTAGAT GCTGGCGGCG GTTTTGGTTA CTTCAGCCAA
AAGCTAGCAC GTCTTGGTCA TGAGGTCGTA CTCTGCGATA TTTCTGCCGA GATGCTCGCC
CAAGCAAAAG AGCAAATCGA TGCCAGCGAT ACGCCATTGG CAATTCGCTT AGTCCATGCG
CCGATCCAAG CCCTATCGAT TACTGAGCAC GGCATGTTCG ATCTCATCCT CTGCCATGCC
GTGGTTGAAT GGCTAGCCGA TGCCAAAACC ACGATGGAAG GCTTACTGAC AATGCTAAAA
CCCAATGGGC TGTTTTCGCT GATGTTTTAC AATAAAGAAG CGATGCGGTT CCATGCCTTA
GTGTCAGGCA ATTTCGACTA TGTTGCCGCC GATCTCAAAG TGAAGAAGAA AGTGCGACTG
ACACCTACAC ATCCTCTGTA TATTCATGAG GTTAAGCTAT GGTTTGCCCA GTGGCAAATG
GCTTTGCTGA AAGAATCAGG TGTACGGGTG ATCCACGATT ACTTGAAGAA ACAGCAAGCG
GCGGATTTTG ACTATCAAAA ACTGCTCAGT ATGGAACTCG AATATTCCCA ACGCGAACCC
TATATTTCAC TCGGCCGTTA TGTGCATTTT CTGGGGCAAA GTACAGCAAC ACACTCTGAA
TAA
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| Protein sequence | MQDKNFDKLA QKFAKNIYGT PKGEIRAAVL WRDLAPALAQ FGDKKLRILD AGGGFGYFSQ
KLARLGHEVV LCDISAEMLA QAKEQIDASD TPLAIRLVHA PIQALSITEH GMFDLILCHA
VVEWLADAKT TMEGLLTMLK PNGLFSLMFY NKEAMRFHAL VSGNFDYVAA DLKVKKKVRL
TPTHPLYIHE VKLWFAQWQM ALLKESGVRV IHDYLKKQQA ADFDYQKLLS MELEYSQREP
YISLGRYVHF LGQSTATHSE
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