| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0555 |
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| Symbol | |
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| ID | 1168424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 574760 |
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| End bp | 576514 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342548 |
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| Product | hypothetical protein |
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| Protein accession | NP_716191 |
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| Protein GI | 24372149 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGTT TAGATCTGGC AAAAGAGCTT GATAAGATAA TCATAAAGGG GGCAATCAGC
CCGCTTTTTC AGCCCATTTT CAATATATTG GAACATAAGA TCCACGGGTT TGAGGCACTC
AGTCGTGGGC CAGAACATAG CCCGCTCTAT TCACCGGTTC CTTTATTTAA AACCGCTGAA
CATCACGGCA AGCTGAGTGA ACTTGAAACC CTGTGCCGCC GTATTTCACT GGAACAATTT
AAGCTACGCC AGTTTCAAGG GCGATTGTTT ATCAATATTT CCCCTAAAGC CCTGCTCGAT
CCGACCCATC CTAAAGGAAT GACACTGCAG CTGTTACAAC AGCTCGGCAT TTCTCCCTCA
CAGGTGGTAA TTGAGTTATC GGAGCAATAT CCAGCCGATG ATATTGATTT ACTCAAGTCT
TGCCTGAATC ACTATCGTAG CCAAGGGTTT ATGACAGCCA TTGATGACTT GGGTGCTGGT
TATTCGGGTT TAAGGCTTTG GTCAGAGTTA TCCCCTGACT ATGTAAAAAT CGACCGGCAC
TTTATCCATC AAATCGATTC AACCCCAGTA AAACAAGAAT TTGTCCGCTC GATTGTCGAA
CTGTGTCAAA GCCTTACCTG TAAAGTGATT GCCGAAGGGA TTGAAACCCA AGAAGAACTT
GCCGTACTTA AACAACTAGG AATCGTTTAT TGCCAAGGTT ATTTGCTTGG TCGCCCCGAG
GCACAACCGA GTCGCGCCAT GAAAGCGACC TTAGTCCCTA ACAATACTCA AATTCAGCCC
AGATACAGTG AATCCGCCGA AAGCCTCTGT ACCAGCGCCA TCACGGTTGT CCCCACACTC
AAACTTAAAC ACTTAAGCGA TACTTTTAGC TCCCAGCCAG CCTTACAGGC CGTGGTTGTG
GTGCAAGACC AGCTCCCATT AGGGATCATT AGCCGAGCGA CTCTGCTCGA ACTCTTCAGT
ACTCCCTATG GTCGGGCGCT ACATGAAAAT CATGCGGTGA GTGAAGTGAT GGATCCCCAA
GTGCTGCAGA TTGAAGCTAA CGAGCCACTC TCCATTGTGA GCCAATTATT AACATCAGAA
AGTGCCAATA CGGTCGCTCA GCAATTTATC ATCCTTCGCA GGGGGAAATT ACTCGGGATT
GGCCACACTA AGGATTTGTT ACAGCGGATC ACCGAGCACA GGATCAAAAT GGCAAGGCAT
GCCAATCCCT TAACCGATTT ACCTGGTAAT GTACCGATCC AAGAAGAACT TAAGCGTCTC
AGAACCCAGC AAAAACCCTT CTATTTGGCC TATTTTGACC TGTGTCACTT TAAACCCTAC
AACGATATCT ATGGTTTCTG CCGTGGTGAC GAAGTGATCT GCGAAGTCGC GGATCTGTTA
GTGAAATACA AAACCGACAA TTGTTTTATC GGCCATGTGG GTGGCGATGA CTTTGTCGTG
ATCAGTACCT GTGAGCGACT CATTGATCGT TGCCAACATA TATTGACAGA GTTTGAAGCC
AATAAACCGC TCTTCTATAG TGCAGAGCAT TGGCAAGCCC AAGAAATGCT CGCAGACGAC
AGGCAAGGAC AAGCTTGTTA TCACAAATTG ATCAGCCTAA GTGTCGGCGT GCTCACTCCA
GCACATACCT TCAACTGTAA TGAGCATAGT TTGTCTACCT TAAGTGCAAG GGCAAAAAAA
CAGGCAAAAT CCGCGAGTAA CGGATTTTAC CTGTTAGAAG AGAGGGACAT CAGTCCCCAA
GCATTGAGTG CTTAG
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| Protein sequence | MTSLDLAKEL DKIIIKGAIS PLFQPIFNIL EHKIHGFEAL SRGPEHSPLY SPVPLFKTAE
HHGKLSELET LCRRISLEQF KLRQFQGRLF INISPKALLD PTHPKGMTLQ LLQQLGISPS
QVVIELSEQY PADDIDLLKS CLNHYRSQGF MTAIDDLGAG YSGLRLWSEL SPDYVKIDRH
FIHQIDSTPV KQEFVRSIVE LCQSLTCKVI AEGIETQEEL AVLKQLGIVY CQGYLLGRPE
AQPSRAMKAT LVPNNTQIQP RYSESAESLC TSAITVVPTL KLKHLSDTFS SQPALQAVVV
VQDQLPLGII SRATLLELFS TPYGRALHEN HAVSEVMDPQ VLQIEANEPL SIVSQLLTSE
SANTVAQQFI ILRRGKLLGI GHTKDLLQRI TEHRIKMARH ANPLTDLPGN VPIQEELKRL
RTQQKPFYLA YFDLCHFKPY NDIYGFCRGD EVICEVADLL VKYKTDNCFI GHVGGDDFVV
ISTCERLIDR CQHILTEFEA NKPLFYSAEH WQAQEMLADD RQGQACYHKL ISLSVGVLTP
AHTFNCNEHS LSTLSARAKK QAKSASNGFY LLEERDISPQ ALSA
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