Gene SO_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0549 
Symbol 
ID1168418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp571288 
End bp572091 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content45% 
IMG OID637342542 
Productchemotaxis protein CheY/response regulator receiver domain-containing protein 
Protein accessionNP_716185 
Protein GI24372143 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATGA CTCATTTATC GCCTAGCGAA TTATCGATGC TTATTGTTGA ACCATCGGAA 
ACCCAGCGCC GAATTATCAT CAAATGCTTA CAGCAAGAAG GCATTGTTAG CATCGAACAT 
GCTGCCAATA TTGCAGAAGC CAAGGGGCTC ATTGCTCGAC ACAAACCGGA TCTCATCGCC 
AGCGCAATGC ACTTTGAGGA TGGTACCGCG ACGGAATTTT TAAGCTACCT ACGCAGTAAA 
AGCGAGTATA AAGATATTCA ATTTATGCTG GTCTCGAGTG AATGTCGCCG CGAGCAATTG 
GAGAGTTTCC GTCAATCGGG GGTGGTTGCT ATCCTGCCAA AACCCTTTAA TGCCGAGCAT 
TTAGGCAAAG CGCTCAATGC AACTATCGAT TTACTCAGTC ACGATGAGCT CGACTTAAGC 
CACTTCGATG TGCACGATGT ACGAGTACTT GTGGTTGATG ACAGCCGCAT GGCACGCAAT 
GTGATCAAAC GAACGATTGG TAATTTGGGG ATAAAACTAA TTACCGAAGC TGAAGATGGT 
GCGCAAGCCA TTGAGTTAAT GCGTCATAAT ATGTTTGATT TAATTATCAC CGATTACAAT 
ATGCCCAGCG TTGATGGACT GGCATTAACG CAATTTATCC GTAGTGAAAG CCAGCAATCA 
CATGTGCCAA TTTTAATGGT CTCGTCTGAG GCTAACGATG CACATTTAAG CAATGTATCT 
CAAGCTGGGG TGAATGCCCT ATGCGACAAG CCCTTCGAAC CCAAATTGGT TAAGCAACTC 
TTATATCAAC TGCTCGAAGA ATAA
 
Protein sequence
MTMTHLSPSE LSMLIVEPSE TQRRIIIKCL QQEGIVSIEH AANIAEAKGL IARHKPDLIA 
SAMHFEDGTA TEFLSYLRSK SEYKDIQFML VSSECRREQL ESFRQSGVVA ILPKPFNAEH 
LGKALNATID LLSHDELDLS HFDVHDVRVL VVDDSRMARN VIKRTIGNLG IKLITEAEDG 
AQAIELMRHN MFDLIITDYN MPSVDGLALT QFIRSESQQS HVPILMVSSE ANDAHLSNVS 
QAGVNALCDK PFEPKLVKQL LYQLLEE