| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0541 |
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| Symbol | |
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| ID | 1168409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 560624 |
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| End bp | 562060 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342533 |
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| Product | metallo-beta-lactamase family protein |
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| Protein accession | NP_716177 |
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| Protein GI | 24372135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC AGTTTTTAGG TGCAGCTCGG GAAGTCACTG GTTCTTGTCA TTTAGTCACA
GTGGCGGGGA AGCACCTGTT GCTCGATTGC GGCTTAATCC AAGGTGGTAA GGCGGATGAA
TTACGTAATC ACGAACCTTT CGTCTTTGAT CCGCAAACCA TTGTCGCCGT TGTGCTAAGC
CATGCCCATA TCGACCATTC AGGGCGTTTA CCGCTCTTGG TCAAAGCGGG TTTTGATGGA
CCCATCTATA CCCATAAAGC CACTGCAGAG CTGTGTGCCA TCATGCTGAA AGATGCGGCC
ATGCTGCAGG TGCGCGATAC CGAAAGGACC AATAAAAAGC GCGCTAAACA TGATCTTGCC
CCCCTAGAGC CACTTTTCAC CGTTGAAGAT GCCGAACAGG CCATCAGCCA GTTTGTTTCG
CTGGAATATG GCCAAGTAAC TCGGGTTATC CCCCATGTGG ATATTTGCCT CTCAGATGCG
GGGCATATTT TAGGCTCTGC CTTAGTCGAG CTGTGGTTAG GCGAAGGTAA GTCCCAGAAG
AAAATCGTTT TCAGTGGTGA TCTTGGCCGG GCGGGCATGC CCATTTTGCA AAATCCTACC
TTAGTGGATA CGGCGGATTT AGTGTTAATG GAAAGCACCT ACGGCAACCG TTTTCACCGC
AGTTGGACCG ATACCCTTGC CGAGTTAAAG GACATTTTTG CTAAGACAGT CAACGAGAGC
CAAGGTAATA TCTTGCTACC GGCTTTCTCG GTTGGGCGGG CACAGGAACT TTTATATCTA
TTTCATTTAT ATGCTAAAGA ATGGGATCTT GGTCGCTGGA AAATCTGTCT AGATAGCCCT
ATGGCGATTG AGGCAACCCG TGTCTATGTT AATAATTATC CGTTAATGGA TGAGGACTTT
AAGCGCTTTA CCCGCCAGCA TCCGGGGCAA CACCCATTAC TGTCGAATGT GGAGTTTATT
CAAACCACGG AAGAATCTAT CGCCCTCAAC GAGGTGCATA AAGGGTTGAT TATTATTGCT
GGTAGCGGCA TGTGTAACGG CGGTCGTATT CGCAGCCACC TCGAACATAA TCTGTGGCGA
TCTGAATGTG ATGTGATTAT CTGTGGTTTC CAAGCACTCG GCACGCCCGG CCGCGCCTTA
GTTGATGGTG CCAAGGAGCT TACTATCCAT GGCAATAGCG TCAACGTTGC TGCTAAGTTG
CATACTGTGG GGGGCTTATC TGCCCATGCG GACCAGGCAG AGTTGTTACG TTGGTATCGC
CATTTTGAAG AGCAGCCCCC TTTGGTGCTG GTTCATGGGG AGCCCGAAGC CCAGCAGGGA
TTAGTGGCGG TCATGAATCA AGATCCTAAA ACTAAACCTA AAGCGCTCGC CATCGCCACC
CGTGGCGACA TGTTGGATTT AACCGCTTTA CCCAAACTGG TATGGGTGAC GGCTTAA
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| Protein sequence | MTLQFLGAAR EVTGSCHLVT VAGKHLLLDC GLIQGGKADE LRNHEPFVFD PQTIVAVVLS
HAHIDHSGRL PLLVKAGFDG PIYTHKATAE LCAIMLKDAA MLQVRDTERT NKKRAKHDLA
PLEPLFTVED AEQAISQFVS LEYGQVTRVI PHVDICLSDA GHILGSALVE LWLGEGKSQK
KIVFSGDLGR AGMPILQNPT LVDTADLVLM ESTYGNRFHR SWTDTLAELK DIFAKTVNES
QGNILLPAFS VGRAQELLYL FHLYAKEWDL GRWKICLDSP MAIEATRVYV NNYPLMDEDF
KRFTRQHPGQ HPLLSNVEFI QTTEESIALN EVHKGLIIIA GSGMCNGGRI RSHLEHNLWR
SECDVIICGF QALGTPGRAL VDGAKELTIH GNSVNVAAKL HTVGGLSAHA DQAELLRWYR
HFEEQPPLVL VHGEPEAQQG LVAVMNQDPK TKPKALAIAT RGDMLDLTAL PKLVWVTA
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