| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0538 |
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| Symbol | gapA-1 |
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| ID | 1168406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 557305 |
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| End bp | 558318 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342530 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | NP_716174 |
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| Protein GI | 24372132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCA AAATCGGCAT TAATGGTTTC GGGCGAATGG GGCGTTTAGC ACTGCGCGCG
GCATGGGACT GGGATGAGGT AGAGTTTGTG CAGATCAACG ATCCCGCAGG CGACGCGCAT
ACATTGGCAC ATTTACTCGA GTTTGATTCT GTCCATGGCC GCTGGCGTTA TCCTGTGACG
GCGAATGCTG ATGCGATTCA GATCCAAGAT AAAACTATTC GCACCACGCG CAATAAAGCC
ATTGCCGATA CAGATTGGTC AGGTTGCGAT GTAGTGATTG AAGCCTCCGG CGTGATGAAA
ACCAAAGCGC TATTGCAAGC CTATTTAGAT CAAGGTGTTA AGCGGGTGGT TGTCACTGCT
CCCGTGAAAG AAGACGGCGT GTTAAACGTA GTGATGGGGG TGAATCATCA GTTATACGAT
CCGGCTATGC ATCCCATAGT GACCGCCGCA TCTTGTACCA CCAATTGCCT TGCGCCTGTG
GTGAAAGTGA TCCACGAGCA GATCGGCATC AAACACGGAT CGATGACCAC GATCCACGAT
ATTACTAACA CGCAAACAAT TCTTGATGCG CCCCATAAGG ATTTACGCCG TGCCCGTGCC
TGTGGTCTGA GTTTAATCCC AACCACAACG GGCAGTGCGA CAGCAATTAC TCATATCTTC
CCTGAACTTA AGGGCAAGCT TAATGGTCAC GCTGTACGGG TGCCACTGGC TAATGCTTCA
CTCACCGATT GCGTGTTCGA GCTGGAGCGC GCCGTTACTG AAGCGGAAGT GAATGCGCTA
CTAAAAACCG CCGCCGAGGG CGAGCTTAAG GGCATTTTAG GCTATGAAGA GCGGCCGCTA
GTGTCGGTGG ATTACAAGAC CGATCCGCGC TCAAGCATTG TCGATGCGCT ATCGACCATG
GTGATTAATG GCACTCAACT TAAACTTTAT GTGTGGTACG ACAATGAATG GGGATACGCC
AATCGCACCG CTGAGCTCGC CCGTTTAGTC GGCCAGCTTG ATTTGCCGCG CTAG
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| Protein sequence | MAIKIGINGF GRMGRLALRA AWDWDEVEFV QINDPAGDAH TLAHLLEFDS VHGRWRYPVT
ANADAIQIQD KTIRTTRNKA IADTDWSGCD VVIEASGVMK TKALLQAYLD QGVKRVVVTA
PVKEDGVLNV VMGVNHQLYD PAMHPIVTAA SCTTNCLAPV VKVIHEQIGI KHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS
LTDCVFELER AVTEAEVNAL LKTAAEGELK GILGYEERPL VSVDYKTDPR SSIVDALSTM
VINGTQLKLY VWYDNEWGYA NRTAELARLV GQLDLPR
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