Gene SO_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0535 
Symbol 
ID1168404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp555873 
End bp556868 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content48% 
IMG OID637342528 
Producthypothetical protein 
Protein accessionNP_716171 
Protein GI24372129 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCAAA TATTTACTGA TTTTGCGACT TGGCTAGTGT ACGGAATGTT TGGCCTAGAG 
GCTGGGTCGG CCTTGGGCGG CGCTGTGCAT TTCTTTGTTG AAGATGTCAG TAAAATTTTC
GTATTACTCC TCGTCATGAT TTATGTGATT GCCTTGCTGC GTGCTTCCTT AGACGTTGAG
CGAGTGCGAG ATTATTTAGC GGGAAAAAAT AAAGGCGTAG GTTATTTATT AGGGTCGATT
TTTGGCGCCA TCACGCCTTT TTGCTCTTGT TCAAGCATTC CGGTGTTTTT AGGGTTTACC
TCGGCCGGTA TTCCCCTTGG GATCACTATC GCCTTTTTGA TTACTTCCCC TTTGATTAAC
GAAGTCGCCG TATTGCTGCT GATGAGTTTA CTCGGCTGGA AATTTACCTT GCTCTATGTG
GCGGTAGGTA TGACAGTGGG TATGCTTGGC GGAGTATTGT TAGATGCGAT GAAGGCCGAA
CGTTGGTTGC AATCCTTCGC TGCTGAAGCC CTCCTCCGTG GACGCCAAAT GGCGGCATCT
GATGTAGTGT CTACCGTTGC GCGGGTCTTA TCTTTATCTG AACGTCATCA ATTTGCCAAA
GCTGAGGCGA TTGAGATTTT TGGCCGCGTC TGGAAGTGGG TCATTATCGG CGTAGGTCTT
GGCGCTGCCC TGCACGGTTT TGTACCAGAA GGGTGGATCG AAGCCCACTT AGGCCAAGGC
CAATGGTGGT CTGTGCCTGT GGCCGTATTA ATCGGCATTC CGCTTTATTC GAATGCGACT
GGCATCATTC CTGTGATGGA AAGTCTGCTG GCGAATGGTT TGCCTATTGG CACTACGCTG
GCGTTTTGTA TGAGCACAGT GGCGGCCAGT TTTCCTGAAT TTATTTTACT CAAACAAGTC
ATGCAGTGGC GCTTGTTGGC GTTGCTGTTG GTTGTGCTAT TGACGGCATT TACGTTAGTA
GGTTGGATGT TTAATTTTGC AGCACCTTAT CTTTAA
 
Protein sequence
MFQIFTDFAT WLVYGMFGLE AGSALGGAVH FFVEDVSKIF VLLLVMIYVI ALLRASLDVE 
RVRDYLAGKN KGVGYLLGSI FGAITPFCSC SSIPVFLGFT SAGIPLGITI AFLITSPLIN
EVAVLLLMSL LGWKFTLLYV AVGMTVGMLG GVLLDAMKAE RWLQSFAAEA LLRGRQMAAS
DVVSTVARVL SLSERHQFAK AEAIEIFGRV WKWVIIGVGL GAALHGFVPE GWIEAHLGQG
QWWSVPVAVL IGIPLYSNAT GIIPVMESLL ANGLPIGTTL AFCMSTVAAS FPEFILLKQV
MQWRLLALLL VVLLTAFTLV GWMFNFAAPY L