Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0535 |
Symbol | |
ID | 1168404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 555873 |
End bp | 556868 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342528 |
Product | hypothetical protein |
Protein accession | NP_716171 |
Protein GI | 24372129 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCAAA TATTTACTGA TTTTGCGACT TGGCTAGTGT ACGGAATGTT TGGCCTAGAG GCTGGGTCGG CCTTGGGCGG CGCTGTGCAT TTCTTTGTTG AAGATGTCAG TAAAATTTTC GTATTACTCC TCGTCATGAT TTATGTGATT GCCTTGCTGC GTGCTTCCTT AGACGTTGAG CGAGTGCGAG ATTATTTAGC GGGAAAAAAT AAAGGCGTAG GTTATTTATT AGGGTCGATT TTTGGCGCCA TCACGCCTTT TTGCTCTTGT TCAAGCATTC CGGTGTTTTT AGGGTTTACC TCGGCCGGTA TTCCCCTTGG GATCACTATC GCCTTTTTGA TTACTTCCCC TTTGATTAAC GAAGTCGCCG TATTGCTGCT GATGAGTTTA CTCGGCTGGA AATTTACCTT GCTCTATGTG GCGGTAGGTA TGACAGTGGG TATGCTTGGC GGAGTATTGT TAGATGCGAT GAAGGCCGAA CGTTGGTTGC AATCCTTCGC TGCTGAAGCC CTCCTCCGTG GACGCCAAAT GGCGGCATCT GATGTAGTGT CTACCGTTGC GCGGGTCTTA TCTTTATCTG AACGTCATCA ATTTGCCAAA GCTGAGGCGA TTGAGATTTT TGGCCGCGTC TGGAAGTGGG TCATTATCGG CGTAGGTCTT GGCGCTGCCC TGCACGGTTT TGTACCAGAA GGGTGGATCG AAGCCCACTT AGGCCAAGGC CAATGGTGGT CTGTGCCTGT GGCCGTATTA ATCGGCATTC CGCTTTATTC GAATGCGACT GGCATCATTC CTGTGATGGA AAGTCTGCTG GCGAATGGTT TGCCTATTGG CACTACGCTG GCGTTTTGTA TGAGCACAGT GGCGGCCAGT TTTCCTGAAT TTATTTTACT CAAACAAGTC ATGCAGTGGC GCTTGTTGGC GTTGCTGTTG GTTGTGCTAT TGACGGCATT TACGTTAGTA GGTTGGATGT TTAATTTTGC AGCACCTTAT CTTTAA
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Protein sequence | MFQIFTDFAT WLVYGMFGLE AGSALGGAVH FFVEDVSKIF VLLLVMIYVI ALLRASLDVE RVRDYLAGKN KGVGYLLGSI FGAITPFCSC SSIPVFLGFT SAGIPLGITI AFLITSPLIN EVAVLLLMSL LGWKFTLLYV AVGMTVGMLG GVLLDAMKAE RWLQSFAAEA LLRGRQMAAS DVVSTVARVL SLSERHQFAK AEAIEIFGRV WKWVIIGVGL GAALHGFVPE GWIEAHLGQG QWWSVPVAVL IGIPLYSNAT GIIPVMESLL ANGLPIGTTL AFCMSTVAAS FPEFILLKQV MQWRLLALLL VVLLTAFTLV GWMFNFAAPY L
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