Gene SO_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0530 
Symbol 
ID1168400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp552804 
End bp553415 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content41% 
IMG OID637342524 
Productamino acid transporter LysE 
Protein accessionNP_716166 
Protein GI24372124 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAT TGAGTATTGT GATATTTGGG CTGTTGATTG TGGTTAGCCC TAGTGCCGAT 
TTTGTGTTGG TCTTTAAAAA TAGTGCTATG CATAGCAGAA AAGCGGGGAT GTTGACGGCC 
ATTGGAATCG GTGCGGGTGT CTGTGTGCAT ATTAGCTATT CTATCATTGG GATTAGCCAG 
TTAATTGCCA ATAATGCGGG GTTATTTAGC CTAGTGAAGT ATGTGGGTGC AGCGTATTTA 
ATCTATATTG GGATCGCAGG CTTATTGAGT GCCAAGCTAA CCTTAGATTA TGGGACTCAG 
CTTATTAAAC CAGTTGAAAA TCGAAAGTAC ATTATGCAAG GTTTTTTATG TAATGTACTG 
AATCCTAAAA CGATGATTTT CTTCTTAAGT GTTTTTAGCC AGCTGATATC ATCCCATAGT 
GACAGCTTAG CATTCGTCAT CAGCTATGGT GTTTATATCG CCGTGTTACA CGGGATCTGG 
TTTTGCATCG TCGCGTACTT AGTGACATCA GCCAAAGCCA CTCGAGTATT GAAACGGTTT 
GGTCATAGAA TCAATCAGGC CTGTGGTGTG GGTCTTATAA CCTTTGGCGT AATATTATCA 
ACAAACGATT GA
 
Protein sequence
MELLSIVIFG LLIVVSPSAD FVLVFKNSAM HSRKAGMLTA IGIGAGVCVH ISYSIIGISQ 
LIANNAGLFS LVKYVGAAYL IYIGIAGLLS AKLTLDYGTQ LIKPVENRKY IMQGFLCNVL 
NPKTMIFFLS VFSQLISSHS DSLAFVISYG VYIAVLHGIW FCIVAYLVTS AKATRVLKRF 
GHRINQACGV GLITFGVILS TND