| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0522 |
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| Symbol | mscL |
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| ID | 1168392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 545546 |
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| End bp | 545956 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342516 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | NP_716158 |
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| Protein GI | 24372116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTAA TTCAAGAGTT CAAGGCTTTT GCGTCCCGTG GCAACGTAAT CGATATGGCG
GTGGGTATTA TCATTGGTGC CGCATTTGGC AAGATAGTCT CATCCTTTGT CGCCGATATC
ATTATGCCGC CAATTGGGAT TATCTTAGGT GGTGTAAATT TCAGTGATCT GAGCGTTGTG
CTGCTCGCCG CCCAAGGTGA TGCACCAGCG GTCGTGATTG CCTACGGTAA ATTTATCCAA
ACCGTTATCG ACTTTACGAT TATCGCCTTC GCGATTTTTA TGGGCCTAAA GGCCATTAAC
AGCTTAAAAC GTAAACAAGA AGAAGCGCCT CCGGCGTCAC CAGCACCAAC CAAAGATCAA
GAACTGTTAT CGGAGATCCG CGATCTGCTC AAAGCACAAC AGGAAAAATA A
|
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| Protein sequence | MSLIQEFKAF ASRGNVIDMA VGIIIGAAFG KIVSSFVADI IMPPIGIILG GVNFSDLSVV
LLAAQGDAPA VVIAYGKFIQ TVIDFTIIAF AIFMGLKAIN SLKRKQEEAP PASPAPTKDQ
ELLSEIRDLL KAQQEK
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