Gene SO_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0506 
Symbol 
ID1168378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp532473 
End bp533939 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content50% 
IMG OID637342502 
Producthypothetical protein 
Protein accessionNP_716142 
Protein GI24372100 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA AGGATTTACG CAGCTTTATT GATCATCTGG AAGCCAATGG CGAACTCAAA 
CGCATTAGCT ACCCCGTTGA TCCTCATTTA GAAATGACAG AGATCGCCGA TCGCGTTCTG
CGCGCCCAAG GCCCTGCACT TCTGTTCGAA AATCCCACCA ATCACTCCAT GCCAGTACTG
GCCAACCTAT TTGGTACACC CAAACGCGTT GCCATGGCGC TGGGTAAAGA TGATCCGTTA
GCGCTACGCG AAGTCGGTGA GCTATTGGCG TTTTTAAAAG AACCCGAGCC ACCACGCGGT
TTTAAAGATG CGATTTCAAA AATCCCTATG TTCAAGCAAG CCTTGAATAT GCCGCCCAAG
ACTGTACGTA ATCCTGCCTG TCAGCAAGTG GTTAAAACCG GTGATGATGT TGATTTAACC
CAGTTACCGA TTCAGCATTG CTGGCCAGGC GATGTGGCGC CGCTGGTCAC ATGGGGCTTA
ACCATCACCA AAGGGCCGCG TAAGAGCCGC CAAAACTTAG GCATCTACCG TCAGCAATTG
CTTGGTAAGA ATAAACTCAT TATGCGTTGG CTCTCCCACC GTGGTGGCGC GCTCGACTTT
GCTGATTTTA AAGAACAATT CCCCGGCGAA CGTTACCCTG TGGTTGTTGC CTTAGGCTCC
GATCCAGTAA CCATTTTAGG CGCAGTCACC CCAGTGCCTG ATGCTATGAG CGAATACGCC
TTTGCGGGAC TACTGCGCGG CGAGCGCACC GAAGTCTGCA AAGCCTTAAG CTGCGATTTA
GAAGTGCCAG CCAGCAGCGA GATTATCCTC GAAGGTTATA TTGACCCTAA CGAAATGGCC
GAAGAAGGCC CCTACGGCGA CCACACTGGT TACTACAACG AGACGGATAA ATTCCCTGTC
TTTACCGTGA CTCATATTAC TCACCGTAAA GATCCGATTT ACCACAGCAC CTATACTGGC
CGTCCACCGG ATGAACCCGC CATGCTTGGG GTCGCATTAA ACGAAGTGTT TGTGCCAATC
TTGCGTAAGC AATACCCTGA AATTATTGAT TTTTATCTTC CGCCTGAGGG TTGTTCGTAC
CGGATGGCGG TGATCTCCAT TCGCAAACAA TATCCCGGCC ACGCTAAACG GGTGATGATG
GGCGCTTGGT CCTTCCTGCG CCAGTTTATG TATACCAAAT TTATTGTGGT GGTTGATGAC
GATGTCAATT GTCGCGACTG GAACGATGTG ATTTGGGCCA TTACCACCCG TATGGACCCT
AAACGCGATA CGGTGATGAT CGATAACACC CCTATCGATT ACCTCGATTT TGCCTCCCCT
GTAGTGGGCT TAGGTTCAAA AATGGGTCTC GATGCCACCA ATAAGTGGGA AGGCGAAACC
AACCGCGAAT GGGGCACCCC GATAGTAATG GACCCTAAGG TTAAACAAAA AATCGACTCA
ATTTGGGATG AGTTAGGGAT ATCGTAA
 
Protein sequence
MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAQGPALLFE NPTNHSMPVL 
ANLFGTPKRV AMALGKDDPL ALREVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK
TVRNPACQQV VKTGDDVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL
LGKNKLIMRW LSHRGGALDF ADFKEQFPGE RYPVVVALGS DPVTILGAVT PVPDAMSEYA
FAGLLRGERT EVCKALSCDL EVPASSEIIL EGYIDPNEMA EEGPYGDHTG YYNETDKFPV
FTVTHITHRK DPIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDD DVNCRDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VVGLGSKMGL DATNKWEGET NREWGTPIVM DPKVKQKIDS
IWDELGIS