Gene SO_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0488 
SymbolnosY 
ID1168360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp511684 
End bp512523 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID637342484 
Productcopper ABC transporter, permease protein 
Protein accessionNP_716124 
Protein GI24372082 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGA CACTGATTCA AGCTGTTGCG GTAAAAGAAT TTAAAGACAA CCTGCGTAAC 
CGCTGGTTAT GGCTTATGGC AGGTATGTTG TTGATTCTGT CCCTGTGCGT GAGCTTTATG
GGCAGTGCTG TGTCGGGCAG TTTAGTGGTA TCTGAGAGCG CGCAAATCTT CTCGGGTTTA
GTCACGCTCG CGGTGTTTAT TTTGCCATTG GGCGCCATTT TACTCAGCTA TGATAGCTTT
GTCGGCGAGC GGGAGTCGGG TACCTTGCTG TTGCTGCTTA CCTATCCCTT GGCACGTTGG
CATTTGGTTT GTGGCAAATT ACTCGGCCAT GCCTATGTGA TCGCCACAGC CTGTTTATTG
GGATTTGGCT TAACGGCGCT GTTGTTAGTT GCGCTTGGGG AAGCGCATGC AAGACTGACC
CTAGTGACTG GCTTTATCCA TCTGATTGGC AGTGGGATTT TACTGTCCTT AGTGTTTGTA
CTCTTAGGTT ACTGCGTGAG CCTATGTGTG CGGGAAAAAG CCAAAGCCCT TGGAGTGTTA
CTGTTACTCT GGTTTGTATT GGTATTGGTT TATGATTTAG TACTCTTAAC CGCCCTCGTC
AGCATGGCGG AAGTGCTTAG TCGTCACTTA TTTAACCTAT TGATTTTAAT CAATCCGACC
GATCTTTTCC GGGCGTTAAA TCTGCTAGCA AACCCTGCAG ATAGCTTGTC GGCTAAGAGT
AGTCTTGCCC TCATTGCTCA ATCGGGGATG GGCATCCCTT TAATGTACGG TTTGTTTGTC
GGCTGGTTAG CGGTTTTATC GCTGATTTGT TGTTTTATTT TTAATCGGCA AGAGGTGTAA
 
Protein sequence
MALTLIQAVA VKEFKDNLRN RWLWLMAGML LILSLCVSFM GSAVSGSLVV SESAQIFSGL 
VTLAVFILPL GAILLSYDSF VGERESGTLL LLLTYPLARW HLVCGKLLGH AYVIATACLL
GFGLTALLLV ALGEAHARLT LVTGFIHLIG SGILLSLVFV LLGYCVSLCV REKAKALGVL
LLLWFVLVLV YDLVLLTALV SMAEVLSRHL FNLLILINPT DLFRALNLLA NPADSLSAKS
SLALIAQSGM GIPLMYGLFV GWLAVLSLIC CFIFNRQEV