Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0488 |
Symbol | nosY |
ID | 1168360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 511684 |
End bp | 512523 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637342484 |
Product | copper ABC transporter, permease protein |
Protein accession | NP_716124 |
Protein GI | 24372082 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTGA CACTGATTCA AGCTGTTGCG GTAAAAGAAT TTAAAGACAA CCTGCGTAAC CGCTGGTTAT GGCTTATGGC AGGTATGTTG TTGATTCTGT CCCTGTGCGT GAGCTTTATG GGCAGTGCTG TGTCGGGCAG TTTAGTGGTA TCTGAGAGCG CGCAAATCTT CTCGGGTTTA GTCACGCTCG CGGTGTTTAT TTTGCCATTG GGCGCCATTT TACTCAGCTA TGATAGCTTT GTCGGCGAGC GGGAGTCGGG TACCTTGCTG TTGCTGCTTA CCTATCCCTT GGCACGTTGG CATTTGGTTT GTGGCAAATT ACTCGGCCAT GCCTATGTGA TCGCCACAGC CTGTTTATTG GGATTTGGCT TAACGGCGCT GTTGTTAGTT GCGCTTGGGG AAGCGCATGC AAGACTGACC CTAGTGACTG GCTTTATCCA TCTGATTGGC AGTGGGATTT TACTGTCCTT AGTGTTTGTA CTCTTAGGTT ACTGCGTGAG CCTATGTGTG CGGGAAAAAG CCAAAGCCCT TGGAGTGTTA CTGTTACTCT GGTTTGTATT GGTATTGGTT TATGATTTAG TACTCTTAAC CGCCCTCGTC AGCATGGCGG AAGTGCTTAG TCGTCACTTA TTTAACCTAT TGATTTTAAT CAATCCGACC GATCTTTTCC GGGCGTTAAA TCTGCTAGCA AACCCTGCAG ATAGCTTGTC GGCTAAGAGT AGTCTTGCCC TCATTGCTCA ATCGGGGATG GGCATCCCTT TAATGTACGG TTTGTTTGTC GGCTGGTTAG CGGTTTTATC GCTGATTTGT TGTTTTATTT TTAATCGGCA AGAGGTGTAA
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Protein sequence | MALTLIQAVA VKEFKDNLRN RWLWLMAGML LILSLCVSFM GSAVSGSLVV SESAQIFSGL VTLAVFILPL GAILLSYDSF VGERESGTLL LLLTYPLARW HLVCGKLLGH AYVIATACLL GFGLTALLLV ALGEAHARLT LVTGFIHLIG SGILLSLVFV LLGYCVSLCV REKAKALGVL LLLWFVLVLV YDLVLLTALV SMAEVLSRHL FNLLILINPT DLFRALNLLA NPADSLSAKS SLALIAQSGM GIPLMYGLFV GWLAVLSLIC CFIFNRQEV
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