| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0481 |
|---|
| Symbol | |
|---|
| ID | 1168353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 505400 |
|---|
| End bp | 506179 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637342477 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
|---|
| Protein accession | NP_716117 |
|---|
| Protein GI | 24372075 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CTATGCCAAC TTCTTTTATC CCAAAAACCA TCACAGTGGC GACCTGCGCC
GCATTGTTTG TGTCAATGGC GAGCTTTGCC GCCCCAAGCC TTAAAACCGA TGCAGATAAA
GCGTCATACA GTATCGGTGC ATCTGTCGGT AACTACATTT CTGGCCAGGT TTATAACCAA
GTGGAATTGG GCGCGGAAGT GAATGTGGAT TTAGTCGTTC AAGGTTTTGT GGACGCGCTG
AAAAAGCAAC AGCAATTAAC CGATGAAGAA GTGGTGACGT ATCTCAATCA ACGCGCCGAA
GAATTAAATC AAGTGAGAAA AGCTAACGCT GAAAAATTAG CCGCTGAAAA TATCAAAGCG
GGTGAAGCCT TTCTTGCTGA AAACAAAAAG AAAGCTGGCG TGACTGTGAC CGAATCAGGC
CTGCAATATG AAGTGTTAAC CAAAGGCACA GGTAACAAGC CTAATCCTGA GGATGTGGTG
ACCGTTGAAT ACGTCGGCAA GCTTATCGAT GGCACTGAGT TTGAAAATAC TGTTGGTCGT
AAAGAGCCGA CACGTTTCGC CTTAATGACA GTGATCCCTG GTTGGGAAGA AGGCTTAAAG
CTGATGCCGA TGGGCTCAAA ATACCGTTTT GTCATTCCCG CAAACTTAGC TTATGGCAAT
GAATTTGTGG GTGAAATTCC ACCGCAATCT ACCTTGATAT TTGAAATTGA GCTGAAAAAT
ATCGAAAAGC CAAGTGAGAA GAAAGAAGCC CGCATGATGG GCATGATGCC CGCTCACTAA
|
|---|
| Protein sequence | MKKSMPTSFI PKTITVATCA ALFVSMASFA APSLKTDADK ASYSIGASVG NYISGQVYNQ
VELGAEVNVD LVVQGFVDAL KKQQQLTDEE VVTYLNQRAE ELNQVRKANA EKLAAENIKA
GEAFLAENKK KAGVTVTESG LQYEVLTKGT GNKPNPEDVV TVEYVGKLID GTEFENTVGR
KEPTRFALMT VIPGWEEGLK LMPMGSKYRF VIPANLAYGN EFVGEIPPQS TLIFEIELKN
IEKPSEKKEA RMMGMMPAH
|
|---|
| |