| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0463 |
|---|
| Symbol | |
|---|
| ID | 1168336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 487030 |
|---|
| End bp | 487908 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637342460 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716100 |
|---|
| Protein GI | 24372058 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGGC GTGACAGTGA CCGCAGCTCC AATATCGAAG ACAGACGGGA CCAACAGATG
GCCTCGGCGG GGGTGCCCAG TGCGCTCTTG CTTAGGTTAT TGCCTTTTCT GCTGCAAACT
AAAATCGGCC GAGTGATATT GCTACTAGGC GGGCTATATT TTGCGTTTCA ATACTTTACT
GGCGGATTAT CCCTCGAGCC GAGTAATCAA GCGGGGTTTA GTCAGTCACA GTCGGCCAGC
AATACCGCTG CTCAAGATGA AAATGCCCAG TTTGTGGCGG CGATTCTTGG CACGACGGAG
ACCGTTTGGA ATCAATTACT GCAAGGGCAA TACGTCGAAC CTAAGCTAGT GCTTTATCGC
AATATGACCT CAACCGGATG CGGTATGGGG CAGGCGCAAT CGGGGCCTTT CTATTGCCCC
GCTGACGGCA AAGTGTATAT CGACTTGAGT TTTCTCGAAG AGCTGAAAAA GCTTGGGGCG
TCGGGGGATT TCGCCTTCGC ATATGTTATC GCCCACGAGG TGGGTCACCA TGTGCAGAAC
TTACTCGGCA CCAGCACTAA AGTGCGTCAG GCGCAGCAAG CCGCTGGCAA GGCGCAGGCC
AATCAACTGA GTGTCGCCCT TGAATTGCAA GCCGATTGTT ATGCTGGCGT GTGGGGTCAT
TATGTCGATA GACAGCTCAA TTTGCTTGAG CCTGGCGATG TAGAAGAAGG CATTGCCGCC
GCCAGTGCAG TGGGGGATGA TCGCCTGCAA AAAATGGCGG GTCGCGCCGT GCAACCTGAA
GCCTTTACCC ATGGTAGTTC GGCGGACAGG GTGAAATGGT TTAATATCGG CTTTGCCTCC
GGCAAACCTG CCAGCTGCAA TACTTTTAAT GGCAAATAG
|
|---|
| Protein sequence | MRWRDSDRSS NIEDRRDQQM ASAGVPSALL LRLLPFLLQT KIGRVILLLG GLYFAFQYFT
GGLSLEPSNQ AGFSQSQSAS NTAAQDENAQ FVAAILGTTE TVWNQLLQGQ YVEPKLVLYR
NMTSTGCGMG QAQSGPFYCP ADGKVYIDLS FLEELKKLGA SGDFAFAYVI AHEVGHHVQN
LLGTSTKVRQ AQQAAGKAQA NQLSVALELQ ADCYAGVWGH YVDRQLNLLE PGDVEEGIAA
ASAVGDDRLQ KMAGRAVQPE AFTHGSSADR VKWFNIGFAS GKPASCNTFN GK
|
|---|
| |