| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0450 |
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| Symbol | |
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| ID | 1168325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 477300 |
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| End bp | 478463 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342449 |
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| Product | major facilitator family protein |
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| Protein accession | NP_716087 |
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| Protein GI | 24372045 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAG CTCAACCCAA TCAAAAGCCA GGGCTATTTG TTCCAGTGGC TGGACTCAGT
CTATTTGCCT TGGCGTCAGG CTACTTGATG AGTTTGATCC CGCTCTCGCT CACTTACTTT
GATCTAAGCC TTGATCTTGC GCCTTGGCTG GCGAGTATTT TCTACCTCGG CTTATTACTG
GGCGCACCTT GTATTGCGCC GATAGTCAGC CGCATAGGCC ACAGTAAGGC CTTTATTTTG
TTCTTAAATA TCTTACTGTG CAGCGTTGTA GTTATGGTGT TACTGCCGCA GACAAGTATC
TGGTTGGCAT CACGGTTGAT CGCGGGCTTG GCCGTTGCGG GGATTTTTGT GGTGGTTGAG
TCCTGGTTAC TAATGGCCGA TACCCAAAAA CAACGGGCAA AACGCTTAGG CTTATATATG
ACAGCCCTCT ACGGCGGCAC CGCCATTGGA CAGCTCGCCG TAGATTATTT AGGCACCACA
GGTAATTTAC CCTATTTGGT GGTAATTGGT TTGCTGGCTG CGGCCAGTTT ACCCGCACTT
TTGGTTAAAC GCGGCCAACC GCAGTCAAGT GAACAACACT CTATTGCCCT TTCCGACCTA
AAAACCCTGA GTAAACCCGC CATTGCAGGC TGTTTAGTTT CAGGATTATT ACTCGGCCCC
ATCTACGGTT TATTACCTAT CTATGTATCG CAGGACATGG GGTTTGCCCA GCAAACGGGG
CAATTTATGG CACTGATTAT CTTGGGCGGT ATGATAGTCC AGCCCTTAGT GAGCTATTTA
TCTCCCCGCA TTCAAAAGAG TGTGTTAATG ATCGCCTTTT GCTTAGTGGG TGCTGCTGCG
CTGTTATTAC TGATGCAAAC ATCGCTTGTG GGATTATGGT TGGGTTTTGT GTTACTCGGT
GCTTGCGCCT TTGCCCTTTA CCCCATAGCC ATTAGTCTGG CGTGCGATCA CTTGCCTAGC
AGCCAAATAG TCTCCGCCAC TCAGATTATG TTGCTAAGCT ATTCTGTGGG TTCGGTTATC
GGCCCCGTTG CCGCCAGTCG TTTTGATGAT ATAGAACATG GCTTACCACT CTACTTAGCA
GCAAGCTTTT TAATGACGGC TTGCTACTTA AGCGCACACT TACTCGCACG AAGCAAGGCC
CGCCTACCCA CTGCGAAAGC TTAG
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| Protein sequence | MLLAQPNQKP GLFVPVAGLS LFALASGYLM SLIPLSLTYF DLSLDLAPWL ASIFYLGLLL
GAPCIAPIVS RIGHSKAFIL FLNILLCSVV VMVLLPQTSI WLASRLIAGL AVAGIFVVVE
SWLLMADTQK QRAKRLGLYM TALYGGTAIG QLAVDYLGTT GNLPYLVVIG LLAAASLPAL
LVKRGQPQSS EQHSIALSDL KTLSKPAIAG CLVSGLLLGP IYGLLPIYVS QDMGFAQQTG
QFMALIILGG MIVQPLVSYL SPRIQKSVLM IAFCLVGAAA LLLLMQTSLV GLWLGFVLLG
ACAFALYPIA ISLACDHLPS SQIVSATQIM LLSYSVGSVI GPVAASRFDD IEHGLPLYLA
ASFLMTACYL SAHLLARSKA RLPTAKA
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