Gene SO_0443 details

Gene Information

• Locus tag: SO_0443
• Symbol: zntR
• ID: 1168319
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 471758
• End bp: 472249
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637342443
• Product: zinc-responsive transcriptional regulator
• Protein accession: NP_716080
• Protein GI: 24372038
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02043] Zn(II)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCGAA TTGGTGAGTT AGCCGATTTA TGCGAGGTGA AGGCCGATAC CCTCAGATTC 
TATGAGAAAC ACGGCCTACT TGCGCCTTCG AGCCGTACCG ACTCTGGTTA TCGGGTCTAT 
ACCGATGCCG ACGCGGCGAG GCTGCGTTTT ATTTTGCGGG CGAAGGCCGT GGGTTTTACC 
TTGAGTGAGA TCAGTGAGTT GTTGTCTATC GACCTCGATA AATCCAATTG GGCCTGTGCC 
GATGTCAAGG GTATGGTCGA CCTCAAGTTG GCGCAGGTGC AGGCGAAGAT TGCCGAGTTA 
CTGCATTTTC AAACCAGTTT GCAGAGTCTG TCGAATGCCT GCTGTGGCGG GCCTCGTAGC 
GCCGAACATT GCTCGATTTT AGAGGCGCTG GAGTCGAGTA CCGAGCGAGT TCGGTTTGAG 
CACGACCATG GGCCAGGCTC CCATTCAGAG CATGCTCATA TTGCTGCAAC AGCAGATAAA 
TCAGGGGATT AA 

 

Protein sequence

MYRIGELADL CEVKADTLRF YEKHGLLAPS SRTDSGYRVY TDADAARLRF ILRAKAVGFT 
LSEISELLSI DLDKSNWACA DVKGMVDLKL AQVQAKIAEL LHFQTSLQSL SNACCGGPRS 
AEHCSILEAL ESSTERVRFE HDHGPGSHSE HAHIAATADK SGD