Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0441 |
Symbol | purD |
ID | 1168317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 468430 |
End bp | 469728 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637342441 |
Product | phosphoribosylamine--glycine ligase |
Protein accession | NP_716078 |
Protein GI | 24372036 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAT TAGTTATTGG TGGCGGCGGC CGCGAACATG CCCTAGCGTG GAAAGCGGCT CAGTCGGCTC AGGTAGACAC AGTCTATGTT GCACCGGGCA ATGCGGGCAC AGCCCTTGAA CCCAACATCG AAAACGTCGA CATCAGCGCG ACGGATATTC CTGCGCTAAT CGATTTTGCA AAAATTAATC AAATAGAACT CACTATCGTC GGCCCTGAAG CGCCGCTGGT ATTAGGCGTA GTGGATGCCT TTAACGCTGC AGGCTTACCC ATTTTTGGTC CAACCAAGGC GGCGGCGCAG CTCGAAGGCT CTAAGGCCTT TACCAAAGAC TTTTTAGCCC GCCACAATAT CCCCACCGCA GGTTATAAAA ACTGTACCGA GATTAGCGAT GCCAAAGCCT TCGTGCGTGA ATTAACCGCA ACTACTGGCT ATCCAGTAGT GATCAAGGCC GACGGTTTAG CGGCGGGTAA AGGCGTGATC ATCGCCCAAG ATCAAGCAGA AGCGGATGCG GCAATTGATG ATATGCTCGC CGGTAATAAG TTTGGTGATG CTGGTTCACG CGTCGTCATT GAAGAATTCC TCAAGGGCGA AGAAGCCAGC TTTATCGTGA TGGTCGATGG TAAAAATATC CTTGCCATGG CGACTAGCCA AGACCATAAA GCCCGCGATA ACGCCGACCA CGGTCCAAAC ACCGGCGGCA TGGGCGCTTA CTCCCCTGCG CCAGTCGTTA CCCAAAGCGT ACACGATTGG ACAATTGCCA ATGTTATCCG CCCAACAGTG GATGGTATGG CTGCCGAAGG CAATGTTTAC ACAGGCTTCC TGTATGCGGG TCTGATGATC GCACCAGACG GCAGCGCTAA GGTACTGGAA TACAACTGCC GTTTTGGCGA TCCAGAAACC CAACCTATTA TGATGCGCTT AAAATCAGAC TTAGTTGAAC TCTGTTTAGC AGCAACCCGC GGCGAGCTGG ATAAAGTCAC CGCTGAGTAC GACGAGCGCG CCGCAGTTGG CGTAGTGCTG GCCGCAGGCG GTTATCCAGA TGAGTATCGC AAAGGCGATG TGATTGACGG CCTCAGCTTA GGTAATCACG ATGCCAAGGT CTTCCACGCC GGTACCGAAA TGAAAGGCGG ACATGTAGTC ACTAATGGCG GCCGCGTGTT ATGCGCTACA GCCTTAGGGA ACACAGTGAC CGAAGCACAA AAAGCCGCGT ATCAACTGGT TGATGAAATC CACTGGGATG ATGTGTACTT CCGTACAGAT ATTGGCTATC GCGCCATCGC CCGTGAACAA CAGGGCTAA
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Protein sequence | MKVLVIGGGG REHALAWKAA QSAQVDTVYV APGNAGTALE PNIENVDISA TDIPALIDFA KINQIELTIV GPEAPLVLGV VDAFNAAGLP IFGPTKAAAQ LEGSKAFTKD FLARHNIPTA GYKNCTEISD AKAFVRELTA TTGYPVVIKA DGLAAGKGVI IAQDQAEADA AIDDMLAGNK FGDAGSRVVI EEFLKGEEAS FIVMVDGKNI LAMATSQDHK ARDNADHGPN TGGMGAYSPA PVVTQSVHDW TIANVIRPTV DGMAAEGNVY TGFLYAGLMI APDGSAKVLE YNCRFGDPET QPIMMRLKSD LVELCLAATR GELDKVTAEY DERAAVGVVL AAGGYPDEYR KGDVIDGLSL GNHDAKVFHA GTEMKGGHVV TNGGRVLCAT ALGNTVTEAQ KAAYQLVDEI HWDDVYFRTD IGYRAIAREQ QG
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