| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0425 |
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| Symbol | aceF |
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| ID | 1168303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 441079 |
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| End bp | 443112 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342427 |
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| Product | pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase |
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| Protein accession | NP_716062 |
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| Protein GI | 24372020 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGATGAAGT ACAGGTTATC
GAAATCTGTG CTGCTGTGGG CGATACCTTA GCGGCGGAAG AGTCGATTCT GACCGTTGAA
AGCGATAAGG CGACCATGGA CATTCCTGCG CCTTTCGCCG GTGTGTTAGC CGAGTTGAAA
GTGGCTGTTG GTGACAAAGT CAGTGAAGGC ACCTTAATTG CGTTGATACA AGCAGCGGGT
GCATCTGCTC AAGCTGCTGC GCCAGTTGCT CAAGCTGCCG CTCCTGCGCC AGCCCCAGTA
CAAGCGGCTC CAGCCCCTGT TGTTGCAGCG CCGGCAACGG GTGCAACCAA ATTAGTTGAA
GCTAAGGTTG TCGAAATCAG TGTGCCAGAT ATCGGTGGTG ACACCGATGT GTCAGTTATC
GAAGTCTTAG TTGCTGCTGG CGATAAGATT GAGGTTGACG CTGGCCTTAT CACGCTTGAA
ACCGACAAAG CGACCATGGA CGTACCATCG CCATTCGCGG GTGTGGTAAA AGAAGTGAAA
GTGGCTGTGG GTGACAAGGT TTCCCAAGGC TCACTGGTTA TCATGCTCGA AGTGGGCGGC
GCGGCACCTG CTGCAGCTCC ACAAGCGAAC GCGCCAGCAG CGTCAGCTCC TGTAGCTCAA
GCTGCACCTG CGGCGGCTGT TGCTCCAGTA GCTGCTGTGC CTGTGGTTGC CGTTAAAGAA
ATCCAAGTGC CTGATATTGG TGATGCCAGC AATGTCGATG TGATCGAAGT GCTAGTGTCA
GTGGGCGATA TGATCAGTGC TGACCAAGGT TTGATCACGC TCGAAACCGA TAAAGCAACC
ATGGAAGTAC CAGCGCCATT CGCCGGCAAA CTGCTGTCGT TGACCGTTAA AGTGGGCGAT
AAGGTTTCTC AAGGTAGCGT GATTGCGACG ATTGAAACTA CTTCTGTTGC AACAGTAAGT
GCGGGTGCAG CTACTGCACC TGTGGCTCAA GCCGCAGCTC CTGCTCCTGT TGCCCAAGAA
GCGGCACCAG CCCCTGTTGC TGCTGCACCG AGCCGTCCAC CGGTGCCACA TCACCCAAGT
GCGGGTGCGC CAGTATCTAC TGGTGCGGTG CATGCGTCTC CTGCGGTTCG CCGTTTGGCC
CGTGAATTTG GTGTAGACCT CACTCAAGTG ACGGGTTCTG GCCGTAAAGG TCGCATCATG
AAGGAAGACG TGCAGGCGTA TGTGAAGTAC GAACTGTCGC GTCCTAAGGC GACAGCGGCT
ACCTCAGTTG CAACGGGTAA CGGTGGCGGT CTGCAAGTGA TTGCGGCACC TAAAGTGGAC
TTCAGCAAGT TTGGTGAAGT GGAAGAAATT CCATTAAGCC GTATCCAGAA GATCTCAGGT
CCAAACCTGC ACCGCAACTG GGTAACTATT CCCCACGTGA CTCAGTTCGA TGAAGCTGAT
ATCACCGAAA TGGAAGAGTT CCGTAAACAG CAAAACGACG CGGCGGCGAA GAAGAAAGCC
GATTATAAGA TCACTCCGCT GGTCTTTATG ATGAAAGCCG TGGCGAAAAC GTTGCAACAG
TTCCCTGTGT TCAACTCAAG CCTAAGCAGC GACGGCGAAT CACTGATCCA GAAGAAGTAC
TTCCATATCG GTGTGGCGGT TGATACGCCA AACGGTTTAG TTGTGCCTGT GGTGCGTGAT
GTGGATAAGA AAGGCATTAT CGAGTTATCT CGCGAATTAG CTGATATCTC TATCCGCGCT
CGCGATGGTA AGCTCAAATC TGCCGATATG CAGGGTAGCT GCTTCACTAT TTCAAGTTTA
GGTGGCATTG GTGGTACAGC CTTTACCCCA ATCGTTAACT ACCCAGACGT GGCGATTTTA
GGTGTGTCTA AATCTGAAAT TAAGCCTAAG TGGAATGGTA AAGAGTTCGA GCCTAAATTG
ATGTTGCCAC TGTCGCTATC TTACGATCAC CGTGTGATCG ATGGTGCAAT GGCGGCACGC
TTTAGCGTGA CCCTGTCAGG AATTCTGTCC GATATTCGTA CTTTGATTCT GTAA
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| Protein sequence | MAELKEVFVP DIGGDEVQVI EICAAVGDTL AAEESILTVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIALIQAAG ASAQAAAPVA QAAAPAPAPV QAAPAPVVAA PATGATKLVE
AKVVEISVPD IGGDTDVSVI EVLVAAGDKI EVDAGLITLE TDKATMDVPS PFAGVVKEVK
VAVGDKVSQG SLVIMLEVGG AAPAAAPQAN APAASAPVAQ AAPAAAVAPV AAVPVVAVKE
IQVPDIGDAS NVDVIEVLVS VGDMISADQG LITLETDKAT MEVPAPFAGK LLSLTVKVGD
KVSQGSVIAT IETTSVATVS AGAATAPVAQ AAAPAPVAQE AAPAPVAAAP SRPPVPHHPS
AGAPVSTGAV HASPAVRRLA REFGVDLTQV TGSGRKGRIM KEDVQAYVKY ELSRPKATAA
TSVATGNGGG LQVIAAPKVD FSKFGEVEEI PLSRIQKISG PNLHRNWVTI PHVTQFDEAD
ITEMEEFRKQ QNDAAAKKKA DYKITPLVFM MKAVAKTLQQ FPVFNSSLSS DGESLIQKKY
FHIGVAVDTP NGLVVPVVRD VDKKGIIELS RELADISIRA RDGKLKSADM QGSCFTISSL
GGIGGTAFTP IVNYPDVAIL GVSKSEIKPK WNGKEFEPKL MLPLSLSYDH RVIDGAMAAR
FSVTLSGILS DIRTLIL
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