| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0424 |
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| Symbol | aceE |
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| ID | 1168302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 438400 |
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| End bp | 441066 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342426 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | NP_716061 |
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| Protein GI | 24372019 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTACA AGACGTAGAT CCGTTAGAGA CTCAGGAATG GGTTGATGCC
CTGCAAGCTG TATTAGAACA GGAAGGCCCT GAACGCGCCC ATTTCTTATT AGAGAAGCTG
ATCGATAAAG CGCGTCGTAA TGGCACTCAC TTGCCTTATA ACGCCACAAC GGCTTACCTG
AACACTATCC CTGCGGGTCA AGAGCCGCAC ATGCCTGGTA ACCAAGAGAT GGAACGTCGC
ATTCGCGCCA TCATCCGTTG GAACGCTTTA GCTATGGTGC TTCGTGGTTC TAAGAAAGAT
TTAGAATTAG GCGGCCATAT TTCAAGCTTC GCCTCAAGCG CGACTATCTA TGACGTGTGT
TTCAACCACT TCTTCCGCGG ACCAAACGAA AAAGACGGCG GCGACTTAGT GTATTTCCAG
GGCCATATCG CTCCTGGTAT TTATGCGCGT TCATTCCTTG AAGGTCGTTT AAGCGAAGAT
CAATTAGCTA ACTTCCGTCA AGAAGTGGAT GGCAAGGGTT TATCTTCTTA TCCACATCCA
AAACTGATGC CGGATTACTG GCAATTCCCA ACGGTTTCTA TGGGCTTAGG TCCTATCCAA
GCGATTTATC AGGCGCGTTT CCTGAAATAT CTGACTGACC GTGGTCTGAA AGATTGTTCA
GCACAAACCG TTTACTGTTT CTTAGGTGAC GGTGAGTGCG ATGAGCCAGA AGCCTTAGGT
GCGATTGGTT TAGCGGCGCG TGAAGAGTTA GATAACTTAG TCTTCATCGT TAACTGTAAC
TTACAGCGTC TTGATGGCCC TGTTCGCGGT AACGGTAAGA TCATCCAAGA ACTGGAAGGC
GAATTCCGCG GCGCAGGTTG GGAAGTGGTT AAAGTGATTT GGGGTCGTTA TTGGGACCCA
TTATTGGCCC GTGATACCAG CGGTAAACTG CTGCAGTTAA TGGAAGAAAC CGTTGACGGT
GAATACCAAA ACTGTAAGGC CAAGGGCGGC GCTTATACCC GCGAACACTT CTTTGGTAAG
TATCCTGAAA CGGCCGAAAT GGTGGCTAAC ATGTCAGACG ATGACATTTG GCGCTTAAAC
CGTGGCGGTC ATGATCCAGT AAAAGTGTAC GCTGCCTTAG ATCACGCACA AAAAACTAAA
GGTCGCCCAA CGGTGATTTT AGCTAAGACT GTAAAAGGTT ACGGCTTAGG TGATGCGGGT
GAAGGTAAAA ACATCGCTCA CAACGTGAAG AAAATGGGTA TCGAGTCTAT TCGTTACTTC
CGCGATCGTT TCAATATCCC GATCCCTGAC GATCAATTAG AAGATCTGCC GTTCTACCAC
CCAGGTCCAG ATTCGGAAGA AGTGAAGTAC ATGATGAGCC GTCGTGCCGC GCTGCATGGT
AGCGTGCCAC AACGTCGTGA GAAGTTCAGC GAAGAGCTGG AAGTGCCATC ACTGAAGATT
TTCGATTCGA TTTTACAGGG CTCTAACGGC CGTGAAATTT CGTCAACTAT GGCGTTTGTT
CGCGTACTGA CTGCACTGTT AAAAGACAAG AAAATTGGCA AAAATATTGT GCCAATTATC
CCTGACGAAG CGCGTACTTT CGGTATGGAA GGTCTGTTCC GCCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATACGT ACCGCAAGAC TCTGACCAAG TGGCTTACTA TCGTGAAGAT
AAAACCGGTC AAGTATTGCA AGAAGGGATT AACGAACTGG GTGCAATGTC ATCTTGGGTA
GCAGCAGCGA CCAGCTACTC AGTCAACGAT ACACCTATGA TCCCATTCTA CATCTACTAC
TCAATGTTCG GTTTCCAACG TATTGGCGAC ATGGCTTGGG CTGCAGGTGA TATGCGTGCA
CGCGGCTTCT TAGTCGGTGG TACGTCTGGC CGTACAACGC TTAACGGCGA AGGCTTACAG
CATCAGGATG GTCACAGCCA CGTATTGGCT AACACTATCC CTAACTGTAT TACTTACGAT
CCAACTTACG GTTACGAAAT TGCGGTTGTG GTACAAGATG GTATCCGTCG TATGTACGGC
GAAAAACAAG AAGATATCTT CTACTACCTG ACCACAATGA ACGAAAACTA TATTCAGCCT
GAAATGCCAG AAGGTGCCGA GGAAGGTATC GTTAAAGGTA TCTACAAGCT TGAAACGGTT
AGCGGTTCTG GTAAAGGCAA AGTGCAGTTA CTGAGTTGTG GCACTATTCT TGAGCAAACC
CGTAAAGCGG CGCAGGCGCT GGCGAAAGAC TTTGGTATCA CTGCCGACGT ATTTAGCGTG
ACCAGCTTCA ACGAACTGAC TCGCGATGGT CAAGCGGTTG AGCGTTGGAA CATGCTGCAC
CCAACGCAAA CGCCAAAACA AGCGTATATC AGCCAAGTGA TCTCAAGTGA TGCGCCTGCA
ATCGCAGCGA CTGACTACAT GAAGATCTAC GGCGAGCAGT TACGTGCATT TATGCCAACC
GATTACAAAG TGTTAGGTAC TGACGGTTTC GGTCGCTCAG ACAGCCGTGA CAATCTGCGT
CACCACTTCG AAGTGGACGC TAAGTTCATC GTCATCGCGG CACTGAAATC TCTGGTTGAT
CGTAAAGAAC TGCCTGTTGA TGTGTTAGCG AATGCCATCA AGGAATACGG CATCGACGCA
GACAAGATCA ATCCACAGTA CGCGTAA
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| Protein sequence | MSEDMLQDVD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYNATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRGPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLSED QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS AQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIVNCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALDHAQKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGIESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRRAALHG SVPQRREKFS EELEVPSLKI
FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KTGQVLQEGI NELGAMSSWV AAATSYSVND TPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCITYD
PTYGYEIAVV VQDGIRRMYG EKQEDIFYYL TTMNENYIQP EMPEGAEEGI VKGIYKLETV
SGSGKGKVQL LSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAVERWNMLH
PTQTPKQAYI SQVISSDAPA IAATDYMKIY GEQLRAFMPT DYKVLGTDGF GRSDSRDNLR
HHFEVDAKFI VIAALKSLVD RKELPVDVLA NAIKEYGIDA DKINPQYA
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