| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0407 |
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| Symbol | |
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| ID | 1168284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 423730 |
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| End bp | 425049 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342409 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | NP_716045 |
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| Protein GI | 24372003 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CACATTTATC AAATCAAAAA TTTGCCGACC TACCTCTACA TCCTGAGGTA
AAACAGGCCC TTGCCGAGAA CGGCTTTGAA TTTTGTACGC CGATTCAGGC GTTATCATTA
CCCGTATTAC TTCAATCAAA AGATATCGCT GGCCAAGCTC AAACGGGCAC AGGCAAGACA
ATGGCGTTTT TGGTTGCCAC ATTTAACCAT TTATTGTCGT CCTCCATTCC TGAAGGGCGC
CAATTAAATC AACCTCGTGC CATTATCATG GCACCTACCC GTGAATTAGC GATCCAAATT
GCTAAGGATG CGATTTTACT CGCGAAACAT ACTCGCCTAA AGGTGGGTAT TGTTTATGGT
GGCGAGAGTT ATGATGTTCA ACGTAAAGTG CTCGACCAAG GTGTTGATAT CTTAATCGGT
ACTACCGGAC GGATTATCGA TTATGTGCGT CAGGGCATTA TCAATTTAAA TGCGATTCAA
GCTGTTGTGT TAGACGAAGC CGATCGTATG TTTGACCTCG GTTTTATCAA GGATATTCGT
TTTCTATTCC GACGTATGCC CAATGCCGAT CAGCGCCTGA ATATGTTGTT TTCAGCCACG
CTTTCGATGA AGGTGCAAGA GTTGGCCTAT GATCATATGA ATGATCCAGT GAAAGTCGAA
ATCGCACCTG AAGAAAAAAC CTCCAAGAAC ATCAAAGAAG AAATTTTCTA TCCTTCCCAA
GAAGATAAGA TGCGTTTACT GCTAACGCTG ATTGAAGAAG ACTGGCCTGA GAAAGCCATT
GTTTTTTCAA ACACCAAGCA TAGCTGTGAA AACTTATGGT CTTGGCTTGA GGGTGATGGC
CACCGTGTGG GTCTGCTTAC GGGCGATGTG CCACAGAAGA AACGTATTCG AATCCTTGAA
CAATTCACTC AAGGCCAATT AGATATTTTG GTCGCGACTG ACGTTGCCGC ACGTGGTCTA
CATATTTCCG ATGTTTCCCA TGTGTACAAT TATGATTTAC CTGATGATTG TGAAGATTAT
GTCCATCGTA TCGGTCGTAC TGGACGCGCG GGTAACAAGG GCGTATCAGT CAGTTTTGCC
TGTGAGGAAT ATGCACTAAA CTTGCCTGCG ATTGAAACTT ATATCAATCA CTCTATTCCT
GTGAGTAATT ATGATCGCGA TGCGCTGCTC GATGATATTC CATCGCCGGT CAAGATCCAC
CGTAAACACC CAGCGGGTGC CCGTAATTTA CGTGAGCGCT CAGGAGCGGG TCGAACTCCA
GGTGCTCATC GCAGTGGTGG TCGTCCGCCT CGCCATGACA GGACGCGTAG ACAGCCGTAA
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| Protein sequence | MSQTHLSNQK FADLPLHPEV KQALAENGFE FCTPIQALSL PVLLQSKDIA GQAQTGTGKT
MAFLVATFNH LLSSSIPEGR QLNQPRAIIM APTRELAIQI AKDAILLAKH TRLKVGIVYG
GESYDVQRKV LDQGVDILIG TTGRIIDYVR QGIINLNAIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPNAD QRLNMLFSAT LSMKVQELAY DHMNDPVKVE IAPEEKTSKN IKEEIFYPSQ
EDKMRLLLTL IEEDWPEKAI VFSNTKHSCE NLWSWLEGDG HRVGLLTGDV PQKKRIRILE
QFTQGQLDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GNKGVSVSFA
CEEYALNLPA IETYINHSIP VSNYDRDALL DDIPSPVKIH RKHPAGARNL RERSGAGRTP
GAHRSGGRPP RHDRTRRQP
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