Gene SO_0404 details

Gene Information

• Locus tag: SO_0404
• ID: 1168281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 418203
• End bp: 421661
• Gene Length: 3459 bp
• Protein Length: 1152 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342406
• Product: hypothetical protein
• Protein accession: NP_716042
• Protein GI: 24372000

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGT CAATGGTATG TCTGGCGATC ACCAGCGCAC TGACCCTTGT GGGGTGTGGT 
GCCGGCGATG AGCCTTATAA AGAACTCCCG AAAGATGAAA AGCAAGTCAC CACTGCTGAC 
ATCGATAAAG CAACTGAGCG GCAGTATCTC TACATTCGCA GCGTGGGTAA GGCTCCGCGT 
TATGCCGCTG AGGTGCGAGG TTTTACTCAA GGTGATCCTA AGTTGGTGAC CTTGCATAAA 
ACTGAGAATG GCATCCAAGT ACGTCAAATT GATCGAGATA ATATCGGATT AGGTCATGAC 
AGTCGTTATC CTAATGAGTA TAACCAAGCG CCAGTATTAA CCATTCCCGG CGAATATATC 
GATTTTAAAT GTACCGAAGA CAAATGGCGT GAGTGTATTA ACGTGGAGCA AGTTAATACC 
GATGCTAATT TAACATGGCA GAATAAACGT TACTTTGTCC CTGATTTTGC CAAAGCTAAA 
ATTGCCGAGT TGGGCATTAA TGACATATTT ACCTTTGGGG AATGCGTTAC TGAAACCGAA 
GCGCCGCGTT TAGTGAATAC TCAAGGCCAA AAAGGCTATG AGATGGATTT AGCCAAGGGC 
GTGGTTAACT TTGAAATTGA GCATACCTAT CAAGCTTCAC CAAGTTGCTT TAACCAATTT 
TACGGTGGCA ATCTCGACAA TTTATCCTTT ACGACCACTG AGTTTATTTC GATTGTGGCG 
GTGGATCAGT TAGCCAGTAA AGACTATCAA GCGATTCCTT ATGCCGAAAA CGAAAAGGGC 
GCATTTGGTT TCTTTACCTC CTCCCATACC TATCGTGATG CGACTGACTC AGAGGGCGTT 
GACGGGTATG TGCGAACTTA CTTGAATCGC TTTAATCCGG CCAAATCGGA ACTGACTTAT 
TACCTGAGTA ATAATTTCTA CGATGCGAAA AATAAACCCT TTTTGGATGC TGCCATTGAG 
TCTGTTACGG CAATTAACAT TCAAAACAAG TTGTATAAAA CCGGTTTTCC ACAGATAAAA 
CTTGAGCAAG CCAACGATAA ACGCCATGGC GACCTACGTT ATAGCAACAT CACTTTATTC 
GATGAGCCTC TGGATAATGG CCTGGCGGGT TATGGTCCAT CAGCGGCAAA CCCGCTAACA 
GGTGAAATTG TTAGTGCGCG AGTCAATCAA TACAGCTCGA ATCTAAAACA AGGCGCCGTT 
CGTTACTATC GTCAAGTGCG TTTAGATTAT AACAGAGGCA AATTGGACGC GAATTCAGTC 
ACATCGTTAA CGGGCGAGCC TTATGTATCG AATTTGAACA AGCCAGATGT CAGCCTCGAT 
ACCGCGCCTG TTGAGGCGGC AGCATTTGAG CAACCCACTC AGCAACTCAT TGCTGCACCC 
AAATCGCTGT TATTAACGCC CAAGGATAAT AGCTTCGATG CCTTAGCGGA TTTTGACGAA 
AAAACACAAG CGTTTTGGTC TGAAAACTCA ATGATGCATG TCGATACCGT GTTTGCTACA 
GGTGGTAGTG ATCGTGAATT ACCACGCGGT ATCAAAGGTC ATGAAATTGA CTGGAAAAAA 
GCCGACATGT GGGTTGATGG CAAAGTGGGC GGTAAGTTAG CGGCATTTGA AGATCTGCCC 
ATAAGTTTAC AAGACACCTT AACAACAGCC CTAGCTGCAC AAGCATTTGC TGGCACCTTG 
ACCCATGAGT TAGGACATAC TTTTGGCTTA AGGCATAACT TTGCAGGGAG TCGCGACCAC 
GACAATACCT TTAACCAAGC ACAACTGAAG GAGTTAAAAG CCGCCTTTAG CGATGCAGGT 
TACCCAGACA TTACTGTTAA TGCCGAGTTT TCGAGCCAAA TGGATTATAA CGTGAATCGG 
TTTGCGACCA CGTTTGAACC CTATGACTTA GCTGCATTAC GTTTTGGCTA TGCCCGTGAA 
GTAGAAACGA AGACCAATGA ATTTGTGTCG CTCAAAGCGG AAGATGCTAA GCGTCGTGAC 
GAACTTGCCA AAGGCGTCGT TAACGGTGAT ACCCGATTTG GCGCGCTTTA TAACATCGAG 
CAAAACAATA GCCTACGTCA GTATTCTTTC TGTACTGATG AGCACGTGTC CCTTAACAGC 
AACTGTAATC GTGGAGATGC GGGCAAAAAC TTGGATGATA TTGGTCAGTT TTATATCGAA 
AAGTATTTCG ATAGCTACGA GACCATGAAC CTACGCCATA ATCGTCAATC TTTGTTTGAA 
GATCATAGCC TAAGTTACGC TATTAATCGT AAAGCTCAGT TTGATGAAAT ACGTCAATTC 
ATTGAAGATG TGAGCTTTTT AGAGCAATTA TTTGGTCTAT CTGAAAACTT TTTCGCTGGT 
GAATGCGAAC GATTGGCGGC GGCAGGTAGC GAGGCTTGGT ATTGCGCGAA TCAGCGGGCG 
ATGAATCAGT CGGCAGATTT CTTCCTCAAG CTGGTTGGAG AAAATGATGC GACCCTCGAT 
GTGACATACA AGCAAGCCGA TGGCAGCGTT GCGTTAAGGC AACAGTACAA TTTTGCTAAG 
GTACTTGAGC AATATCGTTT TAAAAGCGGC GATATGAAGG CGCAATTTGA GCCAGGTGAG 
GTGATCAGTC AGTTCTCTGA TTCTCCTGAA GCCTTGAAAG AGTTGATCAT TAAATCGCAA 
ATCAATCCTA AATTTCAGGA TTTATTAACG GCGGATGTTA GCTTTTCGGG TCGCTTACTC 
AACGGCATTA AAACGCCAGC ATCTTCACCT AACCACCCCT ATGTGAATGA ACGCGACGTG 
TTGGGAGTGT GGCCAGATAA ATTGTTAGCC GTGAGAGCCT TAGTATCACG TACCACTCCC 
CGTAGTACGT CAAGCCGTGG CTATAAAGCA TTGGTTGATT TACCTAATGT GGGTCCGGTG 
TTCCAAGACA TGCTGTGTAA AATGACCATG GGCGAAGGTC CTGGCCTGAC TCGCGGTAAT 
ACGCCGCTCT TTACCGAAAG CTGTGGCGTG AGTGGTAAGC TCGATAGCTA TCTGCCTTAT 
TACACTGATT TTGCACAACA AAGTATTGAA CCATTACCTA ATTATGACCG TTCAGTATCA 
CGTTACTTCC AATTTGATAC CGTTAACGGC CAACCAAAAG GTAAGAGTAA TTTACTGCAG 
ATGATATTAC GCCAAGTGGT GCTTGCATCC GTGGACAGTG ACTATCAAGG CGAGCAAAAA 
GCTAGGGTAT GGCGTGAATA CGTTGGTATT CGTTTAGCGG GTCCAGCATT GGCGACTCAA 
GCAGAAGTGA CGGTAAATGG CCGAGTGTAT GCTGCAACCG CAGAAAACAC TTTAGCATTG 
GCGCTGATTA ACCGAATTAA AGAGATGGAA ACCTTTAAGA CGCAGGCCGG TGAGGCCACG 
CTTGCCATCA AGTTAAACAA CGGCACAGTA GGTGAGATCA TTGACAGGCA GCTAAGTCGA 
GATCAGCTAG TGCTCAGTTA TTTACCTGTG CTTGATTAA 

 

Protein sequence

MKKSMVCLAI TSALTLVGCG AGDEPYKELP KDEKQVTTAD IDKATERQYL YIRSVGKAPR 
YAAEVRGFTQ GDPKLVTLHK TENGIQVRQI DRDNIGLGHD SRYPNEYNQA PVLTIPGEYI 
DFKCTEDKWR ECINVEQVNT DANLTWQNKR YFVPDFAKAK IAELGINDIF TFGECVTETE 
APRLVNTQGQ KGYEMDLAKG VVNFEIEHTY QASPSCFNQF YGGNLDNLSF TTTEFISIVA 
VDQLASKDYQ AIPYAENEKG AFGFFTSSHT YRDATDSEGV DGYVRTYLNR FNPAKSELTY 
YLSNNFYDAK NKPFLDAAIE SVTAINIQNK LYKTGFPQIK LEQANDKRHG DLRYSNITLF 
DEPLDNGLAG YGPSAANPLT GEIVSARVNQ YSSNLKQGAV RYYRQVRLDY NRGKLDANSV 
TSLTGEPYVS NLNKPDVSLD TAPVEAAAFE QPTQQLIAAP KSLLLTPKDN SFDALADFDE 
KTQAFWSENS MMHVDTVFAT GGSDRELPRG IKGHEIDWKK ADMWVDGKVG GKLAAFEDLP 
ISLQDTLTTA LAAQAFAGTL THELGHTFGL RHNFAGSRDH DNTFNQAQLK ELKAAFSDAG 
YPDITVNAEF SSQMDYNVNR FATTFEPYDL AALRFGYARE VETKTNEFVS LKAEDAKRRD 
ELAKGVVNGD TRFGALYNIE QNNSLRQYSF CTDEHVSLNS NCNRGDAGKN LDDIGQFYIE 
KYFDSYETMN LRHNRQSLFE DHSLSYAINR KAQFDEIRQF IEDVSFLEQL FGLSENFFAG 
ECERLAAAGS EAWYCANQRA MNQSADFFLK LVGENDATLD VTYKQADGSV ALRQQYNFAK 
VLEQYRFKSG DMKAQFEPGE VISQFSDSPE ALKELIIKSQ INPKFQDLLT ADVSFSGRLL 
NGIKTPASSP NHPYVNERDV LGVWPDKLLA VRALVSRTTP RSTSSRGYKA LVDLPNVGPV 
FQDMLCKMTM GEGPGLTRGN TPLFTESCGV SGKLDSYLPY YTDFAQQSIE PLPNYDRSVS 
RYFQFDTVNG QPKGKSNLLQ MILRQVVLAS VDSDYQGEQK ARVWREYVGI RLAGPALATQ 
AEVTVNGRVY AATAENTLAL ALINRIKEME TFKTQAGEAT LAIKLNNGTV GEIIDRQLSR 
DQLVLSYLPV LD