Gene SO_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0396 
SymbolfrdC 
ID1168273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp409686 
End bp410411 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID637342398 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionNP_716034 
Protein GI24371992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCG TAACGCGCGT TCACACTAGG GTGAAAACAC AGGGGATAGG TCACCCTTGG 
TCGGCGAAGG CCGATAGATT ACAGAGCGCG ACAGGCATTA TGCTGGGATG CTTTCTGTTG 
TTACATATGC ACTTCGAGTC GAGCATTTTG CTGGGCAAAG AGGCATTTTA CCAAGTCGTA 
CAACTGCTTG AAGGCGGCAT GTTTAGTAGT ACTGGCCATG GTTTTCCTAT GGTCACTAAA 
GTCTTTTCGG TCTTTATGCT GTTGGTGGTG ATATTGCACG CCGCGGTTGC GCTTAGACGG 
TTTCCGGCAC AACTGGGTCA GTGGCGGGCA TTGCGCTCGC ACTTAGGTTG CATTAACCAC 
CGCGATACCC ATGCTTGGTT TTGGCAGCTG ATCACTGGTT TTATTTTGTT TTTCCTTGTG 
CCAGTGCATC TGTTTACCAT GATCTTAAAT CCTGAGATTG GCCCACATTT ATCCGCCGAG 
CGTGTTTATC ACGATAATGC TTGGCTGCTG TACGCCTTAT TGCTGCCCGC TGTGGTGATC 
CACGCCATGA TTGGTTTGTA CCGTGTGGCG GTTAAGTGGG GCATAACGGC TCAGCGTTCA 
GGTTTACGTA AACTCGCTAA GGTTTTGATT ATCTATTTGT TGTGCCTTGG TAGCGCCAGC 
TTAGTTGCTT ATATGCTTAT CGGCAGCGAG TTGAGCATTC CTGTGCAGCC CTACGTGCCC 
CAGTGA
 
Protein sequence
MISVTRVHTR VKTQGIGHPW SAKADRLQSA TGIMLGCFLL LHMHFESSIL LGKEAFYQVV 
QLLEGGMFSS TGHGFPMVTK VFSVFMLLVV ILHAAVALRR FPAQLGQWRA LRSHLGCINH 
RDTHAWFWQL ITGFILFFLV PVHLFTMILN PEIGPHLSAE RVYHDNAWLL YALLLPAVVI 
HAMIGLYRVA VKWGITAQRS GLRKLAKVLI IYLLCLGSAS LVAYMLIGSE LSIPVQPYVP 
Q