| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0394 |
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| Symbol | |
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| ID | 1168271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 407220 |
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| End bp | 408188 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342396 |
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| Product | hypothetical protein |
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| Protein accession | NP_716032 |
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| Protein GI | 24371990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTG GACCCTATCA ACTGAAGAAT CAGCTGATCG TGGCACCAAT GGCAGGTGTC
ACCGATCAAG CTTTCCGTAA TCTCTGTCTT CGTTATGGTG CAGCCTTAGC GGTGTCGGAG
ATGCTTTCAT CCAATCCTGA GGTTTGGGAT ACGGATAAGA GCCGCCAGCG TATGACACAT
TCTGGTGAGG AAGGTATTCG CTCAGTGCAA ATTGCAGGTG CAGATCCAGA GTTAATGGCG
CAGGCCGCCC AGTTCAACGT TGAACAAGGT GCCCATATCA TTGATATCAA CATGGGATGT
CCTGCAAAAA AAGTGAATAA AAAGCTGGCT GGCTCAGCCC TAATGCAAAA TCCGCCCCTC
GTAAAAGACA TTTTACAAGC CGTGGTTGCC GCAGTAGATG TGCCCGTTAC GTTAAAAATT
CGCACAGGCT GGGAGCCTGA ACACAGGAAC GGTGTTCAAA TCGCCCAGAT TGCCGAGGAT
TGTGGCATCG CCTCGCTGGC CGTTCATGGC CGCACGAGAC AATGCATGTA CAAAGGCAAC
GCCGAGTACG ACACCATTAA AGCAATTAAA CAGAATGTCT CGATTCCTGT TGTCGCAAAC
GGGGATATCG ACAGTCCGGA GAAAGCCCGC TTTGTGCTGG ATTACACCGG TGTCGACGCT
CTGATGATAG GACGGGGTGC TCAAGGACGG CCTTGGATTT TCAGAGAAAT CCAGCACTAC
TTGGAGACGG GTAATAAGCT AGCGCCCATT GAGGTGGCAG AACAGCGTCA AGTGATGCTG
GAACACCTCA CCAAACTTTA TGATTTGTAT GGTGAATATA AGGGTATCCG CTTCGCCAGA
AAACATATTG GATGGTACCT AGACCAGGAG GATCAGCGCC AGTTCCGGGC TGACTTTAAT
CAGCTGGAAA CCGCTGCAGA ACAGTATTCC CTCGTGGAAT ATTATTTTGA TGAATTAGTA
CAGAATTAA
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| Protein sequence | MQIGPYQLKN QLIVAPMAGV TDQAFRNLCL RYGAALAVSE MLSSNPEVWD TDKSRQRMTH
SGEEGIRSVQ IAGADPELMA QAAQFNVEQG AHIIDINMGC PAKKVNKKLA GSALMQNPPL
VKDILQAVVA AVDVPVTLKI RTGWEPEHRN GVQIAQIAED CGIASLAVHG RTRQCMYKGN
AEYDTIKAIK QNVSIPVVAN GDIDSPEKAR FVLDYTGVDA LMIGRGAQGR PWIFREIQHY
LETGNKLAPI EVAEQRQVML EHLTKLYDLY GEYKGIRFAR KHIGWYLDQE DQRQFRADFN
QLETAAEQYS LVEYYFDELV QN
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