Gene SO_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0379 
Symbol 
ID1168256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp390810 
End bp391523 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID637342381 
Producthypothetical protein 
Protein accessionNP_716017 
Protein GI24371975 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA AACAAGCTGA ATTCATTCAA GCTAAAGGTT ATCAAGCACG CGTTACCCGA 
ACCGCGAGAG CCAAAACAGC CTCCATAAAA GTTGAAGAAG GCATGGTTAG TGTAGTCGTA 
CCCAAGGCAT TACCCATAGA ACGAATTGAG CGAATATTAC AAGAAAAACA CCAATGGATT 
ATCGATAAGA TAGCCCTGCA CAAGGGGCTA ATTACCTCAT CAGAAAAGCA GTTTGTCTCT 
GGTGAGGCTA TGCCATACCT TGGCCGCAAT TATCGCTTAA AGGTACATGC AGGCAGTTTT 
GAGCCAGTAA AGCTGGTGCA AGGACGATTA GTCGTTATTG TCCCCGAAGG TTCAGTCCGT 
TCAAACTTAG TCAGGGAAGC ACTTATAGGC TGGTATAAAC GCAGTGCATT ACTCAAACTC 
AGGGAAAAGG TTCGACGTTA TGCAAAGGTG ATTGGAGTTA CCCCTAAATC CGTCAATATC 
AAAACCTTCA AAAGCCGTTG GGGTAGCTGC AATCCTAAAG GTGATTTAGA TTTTAACTGG 
ATTATTGTTA TGGCTCCTAA CCGCATTGTC GACTACGTGG TTGTCCATGA ATTGTGCCAT 
TTAAAGCAAC TCGATCACTC CCCACTCTTT TGGAAGGAGG TTGAACGAGT AATGCCTGAT 
TACGCGGAAT GTAAAGAATG GCTCAAGAAT AACGCCCCAA AACTAACATT CTAG
 
Protein sequence
MSMKQAEFIQ AKGYQARVTR TARAKTASIK VEEGMVSVVV PKALPIERIE RILQEKHQWI 
IDKIALHKGL ITSSEKQFVS GEAMPYLGRN YRLKVHAGSF EPVKLVQGRL VVIVPEGSVR 
SNLVREALIG WYKRSALLKL REKVRRYAKV IGVTPKSVNI KTFKSRWGSC NPKGDLDFNW 
IIVMAPNRIV DYVVVHELCH LKQLDHSPLF WKEVERVMPD YAECKEWLKN NAPKLTF