Gene SO_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0374 
Symbol 
ID1168251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp387097 
End bp387906 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID637342377 
ProductISSod1, transposase OrfB 
Protein accessionNP_716013 
Protein GI24371971 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTCA GTAAGTCAGG CTATTACGAT TGGCATAAAC GCCCTGCAAA CGTGATAAGC 
GTTGAAACAC TGAAGCTTTA TCGCCTTGTT CGACAGCTAT TTAAGCAAAG TCGAGGCAGC
TTAGGGAATC GTGAAATGGT GAAGAAATTG CGCAAGGAAG GCTACCAGGT TGGTCGCTAT
CTCGTTCGTA AAATTATGCA CCGCCTTCGA CTCAAAGCAA CCCAGCGATG TGCTTACAAG
GTGACGACAC AGCGAAAACA CTCAGATGCA GTGGCTGATA ACCTGTTAAA CATGAACTTT
AATCCAGTAT CGGCTAATCA GGTCTGGGCG GGTGACGTGA CCTATTTAAA GACGGGTGAA
GGCTGGATGT ACTTAGCTGT GGTGATGGAT TTATATTCAC GCCGGATTGT GGGATGGCGC
ATAGACAAAC GCATGACCAC AGATTTGATA TCCAAGGCAT TAATAAAAGC CTACAACCTG
CGACAACCAG CGCGAGGGCT GGTATTTCAC AGTGACCGAG GCTCGCAATA TACCAGTAAA
CAATTCGGTA GGCTGCTATC GAGCTATGGT ATCCGAGCCA GCATGGGTGA TGTGGGTGCG
TGTTGGGATA ATGCCGTTGT TGAGCGATTC TTTGGTAGCT TGAAACACGA TTGGATTTTT
AAAGTTGCTC AACCAACAAG GGAGTTTATG AAGCAAGATG TGACGGCTTA CATCAAATAT
TACAACTTGG AGCGACTTCA TTCTGCTAAT AACGATCTGT CACCTGTAGA GTTTGAGAAT
TCTCAAGTAA AAGTGTCCAG TTTGGGTTGA
 
Protein sequence
MSVSKSGYYD WHKRPANVIS VETLKLYRLV RQLFKQSRGS LGNREMVKKL RKEGYQVGRY 
LVRKIMHRLR LKATQRCAYK VTTQRKHSDA VADNLLNMNF NPVSANQVWA GDVTYLKTGE
GWMYLAVVMD LYSRRIVGWR IDKRMTTDLI SKALIKAYNL RQPARGLVFH SDRGSQYTSK
QFGRLLSSYG IRASMGDVGA CWDNAVVERF FGSLKHDWIF KVAQPTREFM KQDVTAYIKY
YNLERLHSAN NDLSPVEFEN SQVKVSSLG