| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0368 |
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| Symbol | |
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| ID | 1168245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 379805 |
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| End bp | 382753 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637342372 |
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| Product | helicase |
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| Protein accession | NP_716008 |
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| Protein GI | 24371966 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCTCA AAGAGCACAT TAACGATGAT GATTTTATTG ATGAAAATCT CATTGATAGC
CAAGGTCGGA TACTCACGGC TCTTTTTAAC AAACAAAACC CGATAGCGAC TGATTTACCT
AAATATACGG CCGCTATATT TCCATTAACG GGGCTCTCTC AGAGTGAGCT CTTTTGCGGG
AGTAATGCGG GATTATCACT TGAAAGTGAG CTTAAACGTG AGATCCGCTC ATCAGATAAA
ATCTATTGGC TGGTGTCATT TATCAAGTGG GCGGGGATTC GCATCTTTAA GCATGAACTT
GAGGAATTTA CACGCAGTGG TAAAGAGTTA CGCATCATCA CGACATCGTA TATGGGCGCG
ACTGATGCTA AAGCTGTCGA GTTTCTAGCC TGCTTACCCA ATACCCAAGT CAAATTAAGT
TACAACACTA AACGTGAAAG GCTGCATGCA AAGTCCTATT TATTCCTACG AAATACGGGT
TTTCATACTG GTTATATCGG TTCTTCAAAT TTATCGCATT CTGCATTAAC CAGCGGGCTT
GAGTGGAACC TTAAGATCAC CACCCAAGAA ATTCCCCACA TTATTGATAA ATCACTCAGT
ACCTTTGAAA CTTACTGGGA ATCGAACGAA TTTGAGCTTT TTAGCGGTGA TGCGAGCAGT
AAAGAAAAGT TAAACAATGC GCTCAAAGAA GCGAAAGGCA GTAGCACTGA ACCGAGCTCA
TTTCATTTTG ACATTAAGCC GTTTGCGCAT CAGCGAGAAA TCCTCGAACA GCTTGCAGTA
GAGCGAAGCG TTCATGGTCG TTTTAAAAAT CTCATCGTCG CGGCCACAGG CACGGGCAAG
ACTATTATAT CTGCGTTCGA TTTCGCGCGA TTTTATAAAC AACATCCAGA AGCCAATTTT
CTATTTGTTG CCCATAGGCA AGAAATATTA CAGCAAGCCC TCGGCGCTTA TCGCGGTGTG
TTAAAGAACA ATCAATTTGG CGAGCTATGG GTGGCAGAGC ATACACCAAA TAGTTACAAG
CACTTATTTG CATCTATTCA AAGCTTGAAT CTGCAACTTG ATAACCTGCC ATTAGCGGCT
GATTTTTATG ATTATATTGT GATTGATGAA GTCCATCACG TTGCTGCGAG TAGTTACCGA
GGACTATTAG AGCATTTTGA GCCAACTATT TTAGTTGGGC TCACTGCAAC CCCTGAACGG
CATGATGGTG TCGATATTTT GGCTGACTTC TGCGGTGTGA TTGCCGCAGA AATACGTTTA
CCCGAAGCCA TCAATCAACG GCATTTATGC CCATTTCAAT ATTTTGCGAT CGATGATGAG
ACAGATCTTC GCAACTTAAA TTGGAGTCGT GGCCGATATG ACGTTGCTGA ACTGAGTAAT
TTATACACTC ATAATGATCA GCGTGTGACG CGTATTATTC GCAGCCTAGC TGAAACCGTA
ACTGATATAG ACAGTATTAA GGCGTTAGCC TTTTGCGTCA GTAGGGAACA CGCCGAGTAT
ATGGCGAAAA AGTTCAATTT ATCGGGGATT AGCGCCGATG TGCTGACCAG CGATAATAGT
GAAGAGCGCC ACGAAAAGCG GCAGAGCTTA GTTAGTGGCA AATTATCCAT TTTGTGTGTG
GTGGATATTT TCAACGAAGG TGTCGACATC CCAGAGGTGG ATACTTTGTT ATTTTTACGG
CCAACGGAAA GTTTGACCAT ATTCCTGCAG CAACTTGGGC GAGGTTTGCG TCTTACTGAT
GATAAACAGT GCTGTACGAT ATTAGATTTT GTTGGCAATT CACGTGATGA ATATGATTTT
TCACAGAAAT TTAGAGCGTT AGTCGGTAAA ACCAATCAGT CGATTAAAGA TGAAATTCTC
AATGATTTTC CGCATCTACC ATTAGGGTGC CGAATTGAAC TTGAGGAGAA AGCGCAGTCG
ATGATTTTGC GTAATATTAG CCGCGCAACG CTCAATGCCA ATCGATTAAC TAGTCTAATG
GCAAACTTTA AACATCAAAC TGACTTGCCG CTCACGTTAG GCAACTTTTT ACGCATGAAC
CCGCAAGTGA GTCTTGAAGA CATTTATCGC ATAAAGATTA ATGGCCAAAG TGGATGGACC
TTATTAGCCG AGGCCGTACA GGGAAATAAG ATTGCAGAGC CTGCAGTTCA GCCTGATTTA
GCCAAGGCTT ATTATCGCGC GATTAACTTC CACTTACTCA GTTGTACTTC AATATCCTAT
TTAATCTTTA TCAAACAGTT ATGCCAAAAT GATTTTGTCT TTAATGGGTT GGATCCTATT
CAAAATCAGT TTGCTTTGAT GTGTCATTAC AACTTTTGGG ATAAGTCAGG AGCGGCTTTA
AACGTTAACA GTTTAGCGGC TAGCTTGCAG ATGTTACGCA ATAAACCGTT ACAGGAAGAA
TTGTTGTCTG TATTGGTTAT ATTGATTAAC CGAATACATC ATCAAGAAAT GGATTTGGAA
TTACTCCAAC CCACAGCGTT GAAAGTGCAC TCTCGTTATA CTCGTGAGCA AATTTTAGCG
GCGATGGGTG CAAGCACATT TGCAGCTAAA TCGCCTTCAA GGGAAGGTGT GCTTGCGATT
AGTGAGCAAA ACCTTGAGTG TTTATTTGTG ACGTTAAATA AATCAGAGAA GCAGTTTTCA
CCGACAACCA TGTATCACGA CTATGCGATT AGTGAGCATC TATTCCACTG GCAATCGCAA
AATAGTGCAC GGCCAGAACG TGGTCGAGGT CTGAGTTATA TTGAGCAACA AAAGCTGGGG
AAAACCGTGT TGTTGTTTGT TCGAGAGCAG TCAAAAGATG GAAATGGCCG CACTATGGGA
TTTGTGAATT TTGGCAAAGT ACATTATGTC AGCCATAACG GTTCACAACC CATGAATGTT
ACATGGCGAT TAGAACAGCC AATCCCTGAT GTAATGTGGC ATGACGCGGC TAAACTGGCA
GTGGGTTAA
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| Protein sequence | MWLKEHINDD DFIDENLIDS QGRILTALFN KQNPIATDLP KYTAAIFPLT GLSQSELFCG
SNAGLSLESE LKREIRSSDK IYWLVSFIKW AGIRIFKHEL EEFTRSGKEL RIITTSYMGA
TDAKAVEFLA CLPNTQVKLS YNTKRERLHA KSYLFLRNTG FHTGYIGSSN LSHSALTSGL
EWNLKITTQE IPHIIDKSLS TFETYWESNE FELFSGDASS KEKLNNALKE AKGSSTEPSS
FHFDIKPFAH QREILEQLAV ERSVHGRFKN LIVAATGTGK TIISAFDFAR FYKQHPEANF
LFVAHRQEIL QQALGAYRGV LKNNQFGELW VAEHTPNSYK HLFASIQSLN LQLDNLPLAA
DFYDYIVIDE VHHVAASSYR GLLEHFEPTI LVGLTATPER HDGVDILADF CGVIAAEIRL
PEAINQRHLC PFQYFAIDDE TDLRNLNWSR GRYDVAELSN LYTHNDQRVT RIIRSLAETV
TDIDSIKALA FCVSREHAEY MAKKFNLSGI SADVLTSDNS EERHEKRQSL VSGKLSILCV
VDIFNEGVDI PEVDTLLFLR PTESLTIFLQ QLGRGLRLTD DKQCCTILDF VGNSRDEYDF
SQKFRALVGK TNQSIKDEIL NDFPHLPLGC RIELEEKAQS MILRNISRAT LNANRLTSLM
ANFKHQTDLP LTLGNFLRMN PQVSLEDIYR IKINGQSGWT LLAEAVQGNK IAEPAVQPDL
AKAYYRAINF HLLSCTSISY LIFIKQLCQN DFVFNGLDPI QNQFALMCHY NFWDKSGAAL
NVNSLAASLQ MLRNKPLQEE LLSVLVILIN RIHHQEMDLE LLQPTALKVH SRYTREQILA
AMGASTFAAK SPSREGVLAI SEQNLECLFV TLNKSEKQFS PTTMYHDYAI SEHLFHWQSQ
NSARPERGRG LSYIEQQKLG KTVLLFVREQ SKDGNGRTMG FVNFGKVHYV SHNGSQPMNV
TWRLEQPIPD VMWHDAAKLA VG
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