Gene SO_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0360 
SymbolrpoZ 
ID1168237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp370404 
End bp370682 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content52% 
IMG OID637342364 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionNP_716000 
Protein GI24371958 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG TAACTGTAGA AGACGCCGTA GAACAAATCG GCAACCGTTT TGATATGATC 
CTGGTTGCGG CGCGTCGTGC TCGCCAAATC GCCGTGCAGG GTAAAGACCC TATGGTTGAA
GAGATGAACG ACAAGCCAAC GGTTATCGCC CTGCGTGAAA TCGAACTAGG TTTAGTGAAT
GCTCACACTT TAGATGCTGA TGAGCGTCAA ACCGTGCGTG AGCGCGAAGC TGCTGAAATC
GCAGCTGTTG CAGCCATCGC TGAAGGCCGT TCACTATAA
 
Protein sequence
MARVTVEDAV EQIGNRFDMI LVAARRARQI AVQGKDPMVE EMNDKPTVIA LREIELGLVN 
AHTLDADERQ TVREREAAEI AAVAAIAEGR SL