Gene SO_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0354 
Symbol 
ID1168231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp361225 
End bp362175 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content45% 
IMG OID637342358 
Productsodium/calcium exchanger 
Protein accessionNP_715994 
Protein GI24371952 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTG CACTTTCAAT TATCGGCGGC TTTCTTATTT TAACCTTAGG CGCAGAAGCC 
TTAGTTCGCG GAGCAACCAC AATTGCGCTG CGTTTAGGCA TAACTCCCCT AGTGATTGGC 
TTAACCATTG TCGCCTTTGG CACCAGCGCT CCGGAGCTTG CGGTCAGCGT TAAAGCGGCA 
CTAGCAGGCA ACAGCGGTAT CGCACTTGGG AATGTCATTG GCTCCAACAT TGTCAACATT 
GGCCTGATCC TCGGGATCAC CGCGTTAATA CGCCCTATCG AAGTCAAATC AGAAATGGTT 
AAGCGTGATA TTCCTATCAT GATCTTGGCA TCTATGCTGT TTTGGGGTTT GCTGTTAGAT 
GGCGAACTCA GCCTGATTGA TGGGGTGATT TTATTATCAT TCATGCTGGG CTACTTAGTT 
TTCAGCTATT TCAGCGCTAA AAACACTAAC GATGCTGATG GTGAGGTTAT CGAAGAAGGC 
CCCAAGAATC CCTTATTATC GCTGCTATTC ATTGCTGTCG GTATCAGCAT GCTTGTCGGC 
GGAGGAATTC TATTTGTGAA TGGTGCGGTT GATTTAGCAA AAGTCTTTGG CGTAAGTGAA 
ATCATTATCG GACTTACTAT TGTCGCTATT GGTACAAGTA TGCCTGAATT AGTGACTTCA 
GTTTTAGCGG CACTCAAAGG CCAAAGTGAT ATTGCAATAG GCAATATTGT GGGATCTAAC 
ATATTTAATA TATTAGGTAT TCTTGGGGTA ACCGCCATTG TTTATCCCGT GTCGGGTCTT 
GGTTTCCAAT CCTTAGACTT TATCGTAATG CTCGCCTTTG CCGTGGTCAT TTTACCTTTT 
GCTTGGACAG GACTACGTAT TGGCCGCCGT GAAGGTGCCA CGCTGCTTAT AGCCTATCTT 
GGCTATTTGA TTTACCTCGT TAACCAAGCC AGTACCCAAG CAGTAGTCTA A
 
Protein sequence
MLIALSIIGG FLILTLGAEA LVRGATTIAL RLGITPLVIG LTIVAFGTSA PELAVSVKAA 
LAGNSGIALG NVIGSNIVNI GLILGITALI RPIEVKSEMV KRDIPIMILA SMLFWGLLLD 
GELSLIDGVI LLSFMLGYLV FSYFSAKNTN DADGEVIEEG PKNPLLSLLF IAVGISMLVG 
GGILFVNGAV DLAKVFGVSE IIIGLTIVAI GTSMPELVTS VLAALKGQSD IAIGNIVGSN 
IFNILGILGV TAIVYPVSGL GFQSLDFIVM LAFAVVILPF AWTGLRIGRR EGATLLIAYL 
GYLIYLVNQA STQAVV