Gene SO_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0346 
Symbol 
ID1168223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp352532 
End bp353248 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID637342350 
ProductGntR family transcriptional regulator 
Protein accessionNP_715986 
Protein GI24371944 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAGG TGAAATCCCT CGCCAGCGAA AAATCGTCGA CTACCTTAGC CGATCAAATT 
TTGGTGCAAA TACAAACCAG CATCATCAAG GGCGAACTGC CTGCCGGCAG TAAGATCAAC 
GAACAAGCCC TCGCCGAAAA ATACGGCATC AGCCGCGGCC CGACCCGCGA AGCGCTGCAA 
ACCTTAGAAA GACAACGCCT TGTAGTCCGT GCGCCCCATG TCGGTGCCCG TGTCGCTCAA 
CTCACAGTGA GTGAGTTAAA CGATTTATAT CAATTACGTA GTGTGCTCGA AGGCATGGCC 
TGTGAACTCG CCGCCAGCCG TATTACTCCA GAACAACTGG CCAAGTTAGA AGACTTACTC 
GCGGTGCAAG AAACCGCGCT GGCCAATGGC GATACCTATT TCCAAGAGGA AGGCGATGTC 
GACTTCCACT ATCAAATCAT CCAAGCCAGC GGCAATAAAC ATCTACAAGA AACCTTAATT 
GGCGGGCTTT ATCATCTGCT GCGGATGTAT CGCTATCAGT GCACCAATAA GAACCGCCCA 
GTAAAAGCCA TTGCCGAACA CAGACGCATA GTCGAAGCCA TTGCCCAGCG TGATGGTGAA 
CTCGCTAGCC TGTTGATGCG TCGCCATATT GAGCAAGGCC GTAAAAATAC CGAATTACGC 
TTGATTGAAT TGCAAGCTAA CGCCGCCGCG AAAGAAACCT TAGCCAATAT CAGCTAA
 
Protein sequence
MNKVKSLASE KSSTTLADQI LVQIQTSIIK GELPAGSKIN EQALAEKYGI SRGPTREALQ 
TLERQRLVVR APHVGARVAQ LTVSELNDLY QLRSVLEGMA CELAASRITP EQLAKLEDLL 
AVQETALANG DTYFQEEGDV DFHYQIIQAS GNKHLQETLI GGLYHLLRMY RYQCTNKNRP 
VKAIAEHRRI VEAIAQRDGE LASLLMRRHI EQGRKNTELR LIELQANAAA KETLANIS