| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0344 |
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| Symbol | prpC |
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| ID | 1168221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 350228 |
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| End bp | 351355 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342348 |
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| Product | methylcitrate synthase |
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| Protein accession | NP_715984 |
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| Protein GI | 24371942 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACG CAAAAAAATT AACGGGTGCA GGATTACGTG GCCAAAGCGC GGGTGAGACT
GCACTAAGTA CTGTAGGTGT ATCGGGCAGC GGCCTGACCT ACCGCGGTTA CGATGTGAAG
GATCTGGCCG AAAACGCCAC CTTCGAAGAA GTCGCTTACC TCATCCTCTA CGGCGAATTA
CCCACCACAG CACAACTTGC GGCCTATAAA ACCAAACTCA AAGGCATGCG CGGCCTACCA
CAGGCATTAA AAGAAGTGTT AGAGCGCATT CCTGCCGACG CCCATCCAAT GGATGTGATG
CGTACCGGTT GCTCTATGCT GGGTAACCTC GAAGCTGAGC ACAGCTTTAG CGAGCAAAGC
CAAATTGCCG ACCGTTTACT GGCGGCCTTC CCATCGATTA TCTGCTACTG GTATCGCTTT
AGCCACGATG GCGTACGTAT CGACACCGAA ACCGATGACG ATCAAATCGG CGCCCATTTC
TTACACCTGC TGCACGGCAA AGCGCCTTCT GCCCTGCACA CCAAAGTAAT GGACGTTTCG
TTAATTCTGT ATGCAGAGCA TGAGTTTAAT GCTTCAACCT TCACCGCTCG TGTGTGTGCA
TCGACGTTAT CGGATATGCA TTCTTGCGTG ACTGGCGCAA TCGGTTCACT ACGTGGCCCA
CTGCATGGCG GCGCCAACGA AGCGGCGATG GAACTGATCC AAGATATGAA AGACGAAGCC
GATGCCCGCG ATGTGCTCAT GGGTAAACTC GAGCGCAAAG AAAAGATTAT GGGCTTTGGT
CACGCCATCT ACCGTGACTC AGACCCACGT AACGCCATCA TCAAAGAATG GTCAGAAAAA
CTGGCAGCAG ATTATGGCGA TGATCGCCTC TATCGCGTAT CGGTCGCCTG TGAAGCACTA
ATGTGGGAAC AGAAAAAACT TTTCTGCAAC GCCGACTTCT TCCATGCCAG TGCTTACCAC
TTTATGGGCA TTCCAACCAA GCTGTTTACT CCAATCTTCG TTTGTTCACG GGTAACGGGT
TGGACGGCAC ATGTGATGGA GCAGCGCTCA AACAACCGCA TCATTCGTCC AAGTGCCGAT
TATGTGGGTG TATCGCCACG CAAAGTGATC CCCATTGCCA ACCGTTAA
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| Protein sequence | MSDAKKLTGA GLRGQSAGET ALSTVGVSGS GLTYRGYDVK DLAENATFEE VAYLILYGEL
PTTAQLAAYK TKLKGMRGLP QALKEVLERI PADAHPMDVM RTGCSMLGNL EAEHSFSEQS
QIADRLLAAF PSIICYWYRF SHDGVRIDTE TDDDQIGAHF LHLLHGKAPS ALHTKVMDVS
LILYAEHEFN ASTFTARVCA STLSDMHSCV TGAIGSLRGP LHGGANEAAM ELIQDMKDEA
DARDVLMGKL ERKEKIMGFG HAIYRDSDPR NAIIKEWSEK LAADYGDDRL YRVSVACEAL
MWEQKKLFCN ADFFHASAYH FMGIPTKLFT PIFVCSRVTG WTAHVMEQRS NNRIIRPSAD
YVGVSPRKVI PIANR
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