Gene SO_0340 details

Gene Information

• Locus tag: SO_0340
• Symbol: ilvE
• ID: 1168217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 340328
• End bp: 341419
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637342344
• Product: branched-chain amino acid aminotransferase
• Protein accession: NP_715980
• Protein GI: 24371938
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
• TIGRFAM ID: [TIGR01123] branched-chain amino acid aminotransferase, group II

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAA AATACGATTT AAAACCTGCG TCCGAACGCC GTACTGAGCA ATTCAAGCCC 
GAAGGAAATG TGGGCTTCGG TAGCCTCAGA ACCGATCATA TGTTTTTAAT GGATTATCAC 
GATGGTGAGT GGCGCGATCC TCGTATTGTG CCCTATGGCC CATTTGAAAT GGCTCCGGGT 
GCAATGGCGC TGCACTATGG CCAGTCAATC TTCGAAGGTG CAAAAGCCTT TATGCATGAA 
GATGGCGAAA TTTACACGTT CCGTATTAAT AAAAACGCTG AGCGTATGAA TCGTTCTGCG 
GATATTGTCT GTATTCCTAA TATCGATGAG CAGATGCAAA TCGATGCGAT CAACGCCTTG 
ATCGATGTGG ATCGTCTTTG GTTCCCGATG CAAGAAGGTG CCTGTTTATA CATTCGCCCC 
TTTATTTTTG CGACCGAAGA CCGTCTGTCT GTAAGCCCAA GTTCGCGCTA CACATTCTGC 
GTGGTGTTAA GCCCAAGTGG TGCTTACTAC GCGGCGGGTG TGAATAAAGG CATTCGTCTA 
CTGATCAGCA AGACTTACCA TCGCGCTGTA TCGGGTGGTA CTGGCGCCTC TAAAGCGGCG 
GGTAACTATG CCGCCTCATT ACGTGCGGGT AAAGCTGCCG CACAGTTTGG GGCCTCACAG 
GTGTTGTATT TAGATGCCAA CAATCAGCAG ATTGAAGAAG CTGGGGCTAT GAACCACTTC 
CACATTCTCA AAGATGGCAC TGTGATTATC CCGACATTCA CCGACACCAT CTTAAAATCG 
ATTACCTCGC AATCTATTAT GGAACTCAGT GAGCTACTCG GCTGCGAAGT GCGCCAAGAG 
ACGGTGATGC TCGATAAGTT TATTGCCGAT ATCGAATCCG GTGAGATTAT CGAGGCGGGT 
GGTTTTGGAA CTGCCGCCGT AGTGTCTGCT GTTGGTTCTT ATATTTTTGA AGATGGCCGA 
GTGGTGACTG TTGGCAACGG CGAGGTGGGT GAGCATATTC AACGCATCTA CAAACTGTAT 
ACCGATATCC AAAAAGGTCA TGTTCAAGGC CCTGAGGGAT GGGTCAAACG CGTCGAGCGT 
GTTGCGCCTT AA 

 

Protein sequence

MEIKYDLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYH DGEWRDPRIV PYGPFEMAPG 
AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QMQIDAINAL 
IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSSRYTFC VVLSPSGAYY AAGVNKGIRL 
LISKTYHRAV SGGTGASKAA GNYAASLRAG KAAAQFGASQ VLYLDANNQQ IEEAGAMNHF 
HILKDGTVII PTFTDTILKS ITSQSIMELS ELLGCEVRQE TVMLDKFIAD IESGEIIEAG 
GFGTAAVVSA VGSYIFEDGR VVTVGNGEVG EHIQRIYKLY TDIQKGHVQG PEGWVKRVER 
VAP