Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0312 |
Symbol | |
ID | 1168192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 317544 |
End bp | 318698 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342319 |
Product | outer membrane porin, putative |
Protein accession | NP_715952 |
Protein GI | 24371910 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CCTGCATCGC ATTAATGCTT CCCATGCTGT TAGTGGCCAT CAACAGCCAA GCGATTGAAC TCTATAACGA TCAAAAAAAC TCATTAGATT TAAGCGGTTG GTTAGGATTC GCGGCACTCA ACGACAGTCA CGATACCTCA GTAATCGATG ACTCCTCCCG AGTACGATTT AGCTTTGAAC GCAGCGAGAG AAATGGCTGG ACCGCCTTTG CCACCACGGA ATGGGGCATT AACATGGTAT CCAGCGATGA CAGTTTAGTG ATGCAAGGTG GTAAACTCGC CGCCGAAAAA ACCGAAGACT TCCTCTACAA CCGTTTAGGT TACGTCGGTA TGTCCCACGA TAAATGGGGT AGCCTCAGCT TTGGTAAACA ATGGGGCGCT TACTACGATG TGGCAGGCAC CACGGACTTA CCGAACGTCT TCGCCGGATA TAGTGTCGGC GCCTATGCCT TTAGCGATGG CGGTTTAACC GGAACAGGCC GCGCCGACTC CGCCTTTATT TACCGCAATA ATTTTGGCCC TGTGCAAATC GCCCTGCAAT ACGCCGCCAA AACCAATGGT GATGTCACCT TGAAAAACGA TGACGGCAGC GAGATGGTGA ATTCAAAACT CAATTTCGAC AGCAGTTACG GCGCTAGTCT AACCTACTCG CTAACCGACA AATTTAAATT GCTCGCCGGC GTTAACCGTG GCGACTTTGA AGGCCACCTA GGTAACACTC AAGTCGATGA AACCAATGAA ATTGTCGGAA TTGGTGCCAT GTACGGTGAC TATTATCACT ATGCCGATAA TCGTGAAGCG AGTGGTCTGT ATGTCGGTTT TAACGCCCAT AAAAGTAAAA ACAATGAACT GGTCGGCGGC GATCTCTACG ATGCCACGGG TGCCGAGCTG ATGACGGCCT ATCAATTCGA CAATGGCTTT GTGCCCATGA TTGTCCTGAG CTATCTCGAC CTAGACACAG ACGCCAATAC GCCCATCCAA GGCAAATGGA CCCGCCAATT CGCCATGTTA GGGCTGCATT ATCGTTACAG TAACGACACT GTGATGTTTG CAGAAATGAA GTTGAATTTC AGTAACATGG ATGATGCTGC GCTCGAAGCG CAGGAAGATA ACGGCTTTGC CGTTGGGATT AACTACTTCT TTTAG
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Protein sequence | MKKTCIALML PMLLVAINSQ AIELYNDQKN SLDLSGWLGF AALNDSHDTS VIDDSSRVRF SFERSERNGW TAFATTEWGI NMVSSDDSLV MQGGKLAAEK TEDFLYNRLG YVGMSHDKWG SLSFGKQWGA YYDVAGTTDL PNVFAGYSVG AYAFSDGGLT GTGRADSAFI YRNNFGPVQI ALQYAAKTNG DVTLKNDDGS EMVNSKLNFD SSYGASLTYS LTDKFKLLAG VNRGDFEGHL GNTQVDETNE IVGIGAMYGD YYHYADNREA SGLYVGFNAH KSKNNELVGG DLYDATGAEL MTAYQFDNGF VPMIVLSYLD LDTDANTPIQ GKWTRQFAML GLHYRYSNDT VMFAEMKLNF SNMDDAALEA QEDNGFAVGI NYFF
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