Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0308 |
Symbol | |
ID | 1168189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 312988 |
End bp | 314208 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637342316 |
Product | hypothetical protein |
Protein accession | NP_715948 |
Protein GI | 24371906 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA CATAAGTTTG GCACCCCCGC TTATCGTCTT GAAACCCATC TACAAACCGT CTCTCGGACA CTGGGCATCG AAGGGTATTT TTTAATCTCG CCAACCTCGA TGACCTTCGT ACTACAACAC GATACCGATC AAGAATATAA CCATGTTGCG CGGGTAAAAC CCGGTGAGTT GGATTTAGGC TCCCTCGCCC GCACCGATGA ACTGGTGGAT GAACTCACCT CGGGCAAACG CACGCTCACC GAAGCCTTAG ACAGGCTAGA GGAAATTGCC AATAAACCCA ACCCCTATGG TCCAGTTTTA ACGTGTTTTT CCTTTGGCAC CTCGGCAGCG GCCTTTGCTA TGCTGATGGG CACAGGGTGG AACGATGTCT TTTGGTCAGG CTTATTAGGC TTATTAGTTT ATGGCTTTGT TTACCGCGCC GAACGTTCGA GCCGTATGGC TGAAGTGTTA GAGCCCTTTG CAACTATCGT CTGCGCCATT GTCGCCTGCG CGATTGCGCG TATTGATCCC AATATTAATA TTCCAGTGGT GATCCTCTCC TCGATCATCA TCTTTATTCC CGGTTTAGCC TTAACCTTGG GGCTTGCGGA GTTGGCCGCC CGCGACTTGA TTTCGGGCAC GGCGCGGATC ATGGACGCCA GTATGCTGTT GTTTAAGCTG TATTTTGGTG CAGTGCTCGG CATGGCGATA GGTAAAGCGA TGTTTGGCGA AGCGATTTAT ATCGAACCAG AAGGCTTGCC CCGCTGGGCG ATTTGGTCGG CAGTCCCCAT TCTCTCAATG GCCTTAGTGT TTATCTTTAA AGCGCGCATG CAAGATTCAC CTTGGGGCGT GCTGGCAGGG ATTGTCGCGT TTTTCTCTGC GATGTTAGGC GGACACTTTT TTGGGGATTC GGTTGGGATC TTTTTCGGCG CCTTAGCTGT GGGGGTTTAC TCCAATCTTT ATGCCCGCTG GATGAAGGCA CCAGCCTCGA TTGCGCTCCT GCAAGGGATC GTTATCTTAG TCCCCGGCAG TAAAACCTAT ATTGGCCTTA ATGCGCTAAT ATCGGGTGAA ACCATGCTTA ACCAGTCCCA TATTGGCTCG CAGATTTTTT TGATTTTTAT GTCGCTTATC GCCGGACTGA TTTTTGCTAA CGTCGTGGTG CCACCAAGGC GTACGCTATA A
|
Protein sequence | MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPVL TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSSRMAEVL EPFATIVCAI VACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL YFGAVLGMAI GKAMFGEAIY IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLYARWMKA PASIALLQGI VILVPGSKTY IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL
|
| |