Gene SO_0298 details

Gene Information

• Locus tag: SO_0298
• Symbol: gmhA
• ID: 1168180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 303607
• End bp: 304200
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637342307
• Product: phosphoheptose isomerase
• Protein accession: NP_715938
• Protein GI: 24371896
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGAAC GCATTAAAGA CAGCTTTACT GAATCTATCC AGACTAAAAT CGATGCAGCC 
GAAGCACTGC CTGAATCCAT TGCCAAAGCG GCGGAGATGA TGGTGCAATG TCTTTTGGGT 
GGCAATAAAA TTCTTGCCTG TGGTAATGGC GGAAGTGCGG GTGATGCTCA GCACTTTTCG 
GCTGAACTGT TAAACCGCTA CGAAATTGAA CGTCCACCAT TGCCCGCGAT TGCCCTGTCA 
ACCGACACAT CGACCATCAC TGCGATTGCC AACGATTACA GCTACGATGA GATTTTCTCA 
AAGCAAATCT TAGCCTTAGG TCAGCCTGGT GATATTCTGT TAGCCATTTC CACCAGCGGT 
AACTCAGGTA ACGTGATTAA AGCAATGGAA GCTGCCCTTA GCCGCGATAT GACTATCGTT 
GCTCTAACCG GTAAAGACGG CGGCGCGATG GCAGGGCTGC TTAGCGTGGG TGACGTTGAA 
ATCCGTGTAC CATCCAACGT GACAGCTCGT ATTCAAGAAG TGCACTTACT GGTGATCCAC 
TGCCTGTGTG ACAATATCGA TCGCACACTC TTCCCACAGG ACGAACAGCA ATGA 

 

Protein sequence

MLERIKDSFT ESIQTKIDAA EALPESIAKA AEMMVQCLLG GNKILACGNG GSAGDAQHFS 
AELLNRYEIE RPPLPAIALS TDTSTITAIA NDYSYDEIFS KQILALGQPG DILLAISTSG 
NSGNVIKAME AALSRDMTIV ALTGKDGGAM AGLLSVGDVE IRVPSNVTAR IQEVHLLVIH 
CLCDNIDRTL FPQDEQQ