Gene SO_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0297 
Symbol 
ID1168179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp303044 
End bp303610 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID637342306 
Productputative lipoprotein 
Protein accessionNP_715937 
Protein GI24371895 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATG CTGCCCCACT GTTAATGGTT TGCATGCTGC TGCAGGGTTG CGCCGGTGCC 
GTTATGGTGG GCGCAGTCAG CGGCGCCATG ATGGCCAACG ACGAGCGTTC AGTGAAGACA 
CAGCTCGATG ATACTAATAC CGATTTCAAG ATCACCAGTG CGCTACTTGA GCATGAAGAT 
CTTAAGAAAC AAACCAATAT CACAGGTGTG TCGGTAAACG GTAATGTGCT GATGATAGGC 
CAAGCCCCCA ACTCAATGCT GAGGGATAAA GCAGTTAAAG TCGTACAAGA CCTTAAGCTT 
GGCGGTAAAA TCCACAATCA GATCCGCATC GGTAATCCAA CGTCTTTCAC GACTCGCAGT 
AACGACACTT GGGTAACAAC CAAAGTAAAG GGCCGGATGC TCAACGAGAA AGCACTAGAT 
GTGACACGGA TTAAAGTGAT CACTGAAAAC GGTGAAGTCT TCCTGCTAGG ACTTATTCAC 
CGCTCACAGG CAGAACTGGC TGTCGACATC GCCCGTAATA CCGCGGGCGT GCGCAAAGTC 
GTTAAAGTGT TCGAATATAT CGAATAA
 
Protein sequence
MRYAAPLLMV CMLLQGCAGA VMVGAVSGAM MANDERSVKT QLDDTNTDFK ITSALLEHED 
LKKQTNITGV SVNGNVLMIG QAPNSMLRDK AVKVVQDLKL GGKIHNQIRI GNPTSFTTRS 
NDTWVTTKVK GRMLNEKALD VTRIKVITEN GEVFLLGLIH RSQAELAVDI ARNTAGVRKV 
VKVFEYIE