Gene SO_0284 details

Gene Information

• Locus tag: SO_0284
• ID: 1168166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 291030
• End bp: 291545
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637342293
• Product: type IV pilus biogenesis protein PilP
• Protein accession: NP_715924
• Protein GI: 24371882
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3168] Tfp pilus assembly protein PilP

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACCT TACCTCTATT GGCGATAAGC CTTTTTTTAA TGGGGTGCAT TGGCGAGCGT 
AGTGATTTAG AGCTATTTGT TACTACAACC AAAGCGCAAC ATGTGGCCCA TATCCCCCCG 
TTAAAAGAGC CACCTAAGTT TGAGCATTTT GCTTATCAGG CAGAATTGAT GCGCAGTCCC 
TTTGTTCCTC CTTCTCGAGA ATTAACGGAA GAAGTGGTTG ATACCAGTAA AAACTGCTTA 
CAACCTGATT TAAAACGTCG TAAGGGACGT TTAGAAACTT ATGCTTTAGA TAACCTGAAA 
ATGCGCGGCA CTTTAAGTGA GGCAAATTTG ACCTGGGCTC TGATTGAAAC GAATGATGGC 
AGTGTATATC GGATGGGTGT GGGTGAGTAT CTAGGGTTGT TTAACGGACG TATAGCTAAA 
GTGGCTCCAC AAAATGTGGA AGTTGTAGAA TTAATTCCCG ATGGTTCAGG TTGTTGGTCA 
GAGCGTACAA ACAACATTGA ACTTTCAGGA AAATAA 

 

Protein sequence

MKTLPLLAIS LFLMGCIGER SDLELFVTTT KAQHVAHIPP LKEPPKFEHF AYQAELMRSP 
FVPPSRELTE EVVDTSKNCL QPDLKRRKGR LETYALDNLK MRGTLSEANL TWALIETNDG 
SVYRMGVGEY LGLFNGRIAK VAPQNVEVVE LIPDGSGCWS ERTNNIELSG K