Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0282 |
Symbol | |
ID | 1168164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 289829 |
End bp | 290413 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637342291 |
Product | type IV pilus biogenesis protein PilN |
Protein accession | NP_715922 |
Protein GI | 24371880 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACA TAAACCTGCT TCCTTGGCGT GAAGAGGCGA GAGAAAAGCA GAAACGCGAC TATATTGGGA TATTGGCAGC GGTATTTTTA GGCTCTGGGA TCTTAGTCTA TGTAGCGCTT TCTTTACTCG AAATAATGAC CGATGAGCAG CGTGAGCGAA ATGCTTATTT ACAGTCAGAG GTTCAGCAGC TCGAAACGCA AATTGCCGAA ATCAAAAAGA TCACAGAACG TAAAAAAGAC ATTGAACGTC GAACTGAAAT TATTTTGAAC CTTCAGCAAT CCCGTAATTT GCCGACACAC GTATTAGATG AGTTGGTTCG CATTGTTCCT CCTGGAATAT ATCTATCGAG TCTTGAGAAA AAAGGTAGTT TATTGCTGAT TGAAGGACGA AGTGAATCTA ACAACAACGT GGCGAACATG ATGCGTAAGG TGAAGGCCTC TGAGTGGTTA ACTGATCCCA ATATGCAATC CATTGTGACT CAAGATGATG AGTTAAGGCA GCTACAACGC TTTAGTTTAA GGGTGAGTAT CAAAGGAGCC ATCGCTGAAG AGCCTGCAAA ACCGGCAAAA GGAGCGAGTA AATGA
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Protein sequence | MANINLLPWR EEAREKQKRD YIGILAAVFL GSGILVYVAL SLLEIMTDEQ RERNAYLQSE VQQLETQIAE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK KGSLLLIEGR SESNNNVANM MRKVKASEWL TDPNMQSIVT QDDELRQLQR FSLRVSIKGA IAEEPAKPAK GASK
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