Gene SO_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0282 
Symbol 
ID1168164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp289829 
End bp290413 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID637342291 
Producttype IV pilus biogenesis protein PilN 
Protein accessionNP_715922 
Protein GI24371880 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACA TAAACCTGCT TCCTTGGCGT GAAGAGGCGA GAGAAAAGCA GAAACGCGAC 
TATATTGGGA TATTGGCAGC GGTATTTTTA GGCTCTGGGA TCTTAGTCTA TGTAGCGCTT
TCTTTACTCG AAATAATGAC CGATGAGCAG CGTGAGCGAA ATGCTTATTT ACAGTCAGAG
GTTCAGCAGC TCGAAACGCA AATTGCCGAA ATCAAAAAGA TCACAGAACG TAAAAAAGAC
ATTGAACGTC GAACTGAAAT TATTTTGAAC CTTCAGCAAT CCCGTAATTT GCCGACACAC
GTATTAGATG AGTTGGTTCG CATTGTTCCT CCTGGAATAT ATCTATCGAG TCTTGAGAAA
AAAGGTAGTT TATTGCTGAT TGAAGGACGA AGTGAATCTA ACAACAACGT GGCGAACATG
ATGCGTAAGG TGAAGGCCTC TGAGTGGTTA ACTGATCCCA ATATGCAATC CATTGTGACT
CAAGATGATG AGTTAAGGCA GCTACAACGC TTTAGTTTAA GGGTGAGTAT CAAAGGAGCC
ATCGCTGAAG AGCCTGCAAA ACCGGCAAAA GGAGCGAGTA AATGA
 
Protein sequence
MANINLLPWR EEAREKQKRD YIGILAAVFL GSGILVYVAL SLLEIMTDEQ RERNAYLQSE 
VQQLETQIAE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK
KGSLLLIEGR SESNNNVANM MRKVKASEWL TDPNMQSIVT QDDELRQLQR FSLRVSIKGA
IAEEPAKPAK GASK