Gene SO_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0272 
SymbolcinA 
ID1168154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp275264 
End bp276538 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content48% 
IMG OID637342281 
Productcompetence/damage-inducible protein CinA 
Protein accessionNP_715912 
Protein GI24371870 
COG category[R] General function prediction only 
COG ID[COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAG AGATGATTTG TACTGGAGAA GAAGTGCTGT CGGGTCAGAT TGTTGATACC 
AATGCTGCCT GGTTCGCCAG CACTATGATG GAGCATGGCA TTGAGATCCA AAGGCGCGTT 
ACAGTGGGTG ATCGCCTAGA GGATTTAATT GCCGTTTTCC AAGAGCGCAG CTTACATGCC 
GATGTGATTT TAGTGAATGG TGGTTTGGGG CCGACAAGCG ATGATATGTC CGCTGAAGCG 
ATGGCTAAGG CCAAGGGGGA ATCGCTGGTC GAAAATTCCG AGTGGCGCCA ACGTTTAGAA 
GATTGGTTTA CGCGCAATAA TCGCGAGATG CCTGTGAGTA ATTTAAAGCA GGCGATGCTG 
CCAGTATCGG CAGTTATGGT GGATAACCCC GTCGGTACTG CCTGTGGATT TAGGGTCAAG 
TTAAATCGAG CTTGGTTGTT CTTTACGCCA GGTGTGCCAT TTGAACTCAA GCATATGGTT 
AAAGAGCAGT TTATTCCCTT TATTCGTGAT GAGTTTAATC TCGACGCTAA GGTGGCGCTT 
AAAAAACTGC TGACCATTGG CCATGGCGAA TCAGCCCTTG CCGATAAAAT TGAGCCGTTG 
GAGTTGCCAG AAGGCATTAC TATTGGTTAT CGCTCTTCAA TGCCGCATAT CGAAATTAAG 
ATTTTCGCGC GAGGTGAAAA GGCGATTGCT CTGCTGCCAC GGGTGGCTGG GCATATCAAA 
ATGGTGTTGG GTACTGCAGT CGTCGCTGAG GATAAAGCGA CACTTGCTGA AGAAATTCAT 
TTTAGACTGC TGAATTCTGG TCTGACCCTG AGTGCGGCAG AGTCGTGCAC TGGCGGTATG 
ATTACCAGTC AATTAGTGGA TTTCCCTGGA AGTTCATCCT ATTTACAGCA TGGTTTAGTG 
ACTTACAGTA ATGAATCCAA AGTGCGAGTC TTGGGCGTTA ATCCGGCGAC GTTAGATGAT 
CACGGCGCAG TGTCGATTCC TACAGTTGAA GAAATGGCGA AGGGCGCACG TGCTATTTTA 
GATAGTGATT TTGCCTTAGC TACCAGTGGG ATCGCAGGAC CGGATGGCGG AACCGAAGAC 
AAACCCGTAG GCACTGTGGC CATTGCCTTG GCGACCCGTA GTGGTGTCTA CAGCCAAATG 
ATTAAGTTGC CAAGACGTTC GCGGGATTTA GTGCGTAGCT TAAGTGCAGC GGTCGCCTAT 
GATATGTTGA GACGTGAGCT ACTGTCGGAA GCTGTGATTG TGGATTATCA GTCGATTGGG 
CGTTTCAGTA AGTAA
 
Protein sequence
MKLEMICTGE EVLSGQIVDT NAAWFASTMM EHGIEIQRRV TVGDRLEDLI AVFQERSLHA 
DVILVNGGLG PTSDDMSAEA MAKAKGESLV ENSEWRQRLE DWFTRNNREM PVSNLKQAML 
PVSAVMVDNP VGTACGFRVK LNRAWLFFTP GVPFELKHMV KEQFIPFIRD EFNLDAKVAL 
KKLLTIGHGE SALADKIEPL ELPEGITIGY RSSMPHIEIK IFARGEKAIA LLPRVAGHIK 
MVLGTAVVAE DKATLAEEIH FRLLNSGLTL SAAESCTGGM ITSQLVDFPG SSSYLQHGLV 
TYSNESKVRV LGVNPATLDD HGAVSIPTVE EMAKGARAIL DSDFALATSG IAGPDGGTED 
KPVGTVAIAL ATRSGVYSQM IKLPRRSRDL VRSLSAAVAY DMLRRELLSE AVIVDYQSIG 
RFSK