| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0263 |
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| Symbol | ccmA |
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| ID | 1168147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 262669 |
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| End bp | 263319 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637342271 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | NP_715903 |
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| Protein GI | 24371861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAAATA TAATTTCAGT AGACACACTG TTATCAGCGA GCAAGCTGAC ATGCATCCGC
GAAGAACGCA TCCTGTTTGA TGAATTAAGT TTTGAGATTA ATGCGGGCGA TATCGTCCAG
ATTGAAGGCC CTAATGGTGC TGGCAAAACC AGTTTATTAC GTATTTTGGC AGGCTTATCT
CGACCCTATG CAGGGCAAAC CTTTTATGTC AATGAAGACA TCAACCGATG TCGCGATGAA
TATAATGAAG ATCTGCTGTA TTTAGGCCAT CTTGCAGGGG TGAAATCTGA GTTAACTGCT
GAAGAAAACC TTAACTTCAA TTTAAGAATC AGTGGCTATG ATGATTTTGA TACATCTGCC
ATATTGGCAA AAGTGAATTT ATCTGGATTT GAAGAAGCCC TTGCAGGGCA TTTATCCGCA
GGTCAGCATC GCAGAACAGC ATTGGCAAGA CTCTGGCACA ATGATTGTAA AATATGGATC
TTGGATGAAC CTTTTACTGC GATAGATAAA AGAGGTGTCG AAGAACTTGA ACAATTGTTT
ATTAAACATG CGGATAATGG TGGCTGCGTG ATCCTTACCA CTCACCAAGA TATGGGCATT
ATCAAAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCGTATA A
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| Protein sequence | MTNIISVDTL LSASKLTCIR EERILFDELS FEINAGDIVQ IEGPNGAGKT SLLRILAGLS
RPYAGQTFYV NEDINRCRDE YNEDLLYLGH LAGVKSELTA EENLNFNLRI SGYDDFDTSA
ILAKVNLSGF EEALAGHLSA GQHRRTALAR LWHNDCKIWI LDEPFTAIDK RGVEELEQLF
IKHADNGGCV ILTTHQDMGI IKDDRLRKIR LDYRFV
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