| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0262 |
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| Symbol | ccmB |
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| ID | 1168146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 261971 |
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| End bp | 262657 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342270 |
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| Product | heme exporter protein CcmB |
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| Protein accession | NP_715902 |
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| Protein GI | 24371860 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GCATCAGCTT TACTCAAGCG TTTTTTACAT TACTGCAGCG GGATCTAAAA
ATCGCGATTC GCCACCGCGG TGATATTTTT AACCCATTGT TATTCTTTAT TATGGTTGTC
ACCCTATTTC CACTTGGTAT TGGTCCAGAA CCGCAAATGT TGGCGCGTAT CGCCCCAGGG
ATTATTTGGG TTGCGGCATT GCTCGCGTCG ATGCTATCGC TTGAGCGCCT TTTTAAAGCC
GATTTTAGTG ATGGCAGCTT AGAGCAGATG CTGCTTAGTC CACAACCGCT CGCCATTTTA
GTATTGGCAA AAGTATTAGC TCACTGGTTA CTCACGGGTG TCCCACTCAT CCTTATCGCA
CCACTGCTAG CTGTGTTACT GAACTTAGAA GCCAACAGCT ATGGAGCCTT GATTGCCACA
CTGGCTTTAG GCACTCCAGT GTTGTCACTC TTAGGTGCGA TTGGCGTAGC ATTAACCGTT
GGTCTGCGCA AAGGCGGCGT ACTGTTGAGT CTACTCATCC TACCACTTTA TATTCCTGTG
CTAATTTTCG CGACCAGTGC CATTGATGCA GCAGGAATGA ATTTACCCTA TGACGGTCAG
CTCGCTATAA TTGGCGCAAT GCTGATCGGT TCGTTAACCT TGGCACCTTT TGCAATAGGT
GCATCTCTGC GAGTGAGTAC TAACTAA
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| Protein sequence | MKRGISFTQA FFTLLQRDLK IAIRHRGDIF NPLLFFIMVV TLFPLGIGPE PQMLARIAPG
IIWVAALLAS MLSLERLFKA DFSDGSLEQM LLSPQPLAIL VLAKVLAHWL LTGVPLILIA
PLLAVLLNLE ANSYGALIAT LALGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV
LIFATSAIDA AGMNLPYDGQ LAIIGAMLIG SLTLAPFAIG ASLRVSTN
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