| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0260 |
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| Symbol | ccmD |
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| ID | 1168144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 261023 |
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| End bp | 261223 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342268 |
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| Product | heme exporter protein CcmD |
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| Protein accession | NP_715900 |
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| Protein GI | 24371858 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTCG ATTCTATCAG TGATTTTTTC AACATGGGTG GCTATGCCTT TTATGTATGG
CTTGCCTATG GCGTGACCTT CTTCTGTTTG TCGACGCTGA TCATCACAAG CGCACGCCAA
AAGCGCAAAG TGCTTATTGA AATAGCGAAA AAGATGAACC GCGAAGAGCG CCTCAAAGAA
ACTAGGAGTA ACAAATCGTG A
|
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| Protein sequence | MQFDSISDFF NMGGYAFYVW LAYGVTFFCL STLIITSARQ KRKVLIEIAK KMNREERLKE
TRSNKS
|
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