| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0251 |
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| Symbol | secY |
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| ID | 1168134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 254733 |
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| End bp | 256073 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637342258 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | NP_715891 |
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| Protein GI | 24371849 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GACTTTCTGA GTTGAAAGCT
CGCCTCCTGT TCGTGATTGG TGCGATTATC GTCTTTAGGG CCGGTTCGTT TGTACCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AGCAAAGTGG AACCATCCTT
GGCATGTTTA ACATGTTCTC GGGTGGTGCC CTTGAGCGTG CTTCCATTTT TGCATTAGGT
ATCATGCCGT ACATTTCGGC ATCGATTATT ATGCAGTTAT TGACTGTTGT GCATCCTGCA
CTGGCTGAAT TGAAAAAAGA AGGCGAGTCA GGACGTAAAA AAATTAGTCA ATATACACGT
TGGGGTACGT TAGTGCTGGG TACATTCCAG TCGGTCGGTA TTGCAACAGG GTTACCAAAC
TTAGTCCCAG GCCTCGTGGT CAATATTGGA TTCGGTTTCT ACTTTGTTGC CGTTGTGAGT
TTAGTTACTG GAACTATGTT TCTGATGTGG CTAGGTGAGC AAATTACCGA ACGAGGTATA
GGTAATGGTA TCTCGATTTT AATTTTCGCA GGTATTGTTG CTGGATTACC TTCCGCTATC
GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACCTGAATG TGTTAGTATT GTTGTTGCTT
GCGGTAATTA TATTCGCTGT GACTTATTTC GTGGTATTCG TGGAGCGTGG TCAACGTCGT
ATCGTTGTTA ACTATGCTAA GCGTCAGCAA GGCCGTAAGG TATTCGCTGC GCAAAGTACC
CACCTACCGT TGAAAATAAA TATGGCTGGT GTAATTCCAC CAATTTTTGC GTCAAGCATC
ATTTTGTTCC CAGGTACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCTAT GTCATGGTTA
AGTGATTTTT CACTGGCTGT GTCTCCTGGA CAACCGCTTT ACTCATTATT ATATGCGGCA
GCAATTATTT TCTTCTGTTT CTTCTATACT GCGTTGGTAT TTAACCCACG TGAAACAGCA
GATAACTTGA AGAAAAGTGG TGCATTCATC CCTGGGATCC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTGAT GACCCGTTTG ACATTAGCAG GCGCGTTATA CATTACCTTT
ATCTGTTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCAC ATCAGTATGA GTCTGTGATG AAGAAAGCTA ACCTAGTTAA CAAAGCGAAT
TTAGATCGTT TTGGTCGCTA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQSGTIL
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
WGTLVLGTFQ SVGIATGLPN LVPGLVVNIG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIIFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAA AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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