Gene SO_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0232 
SymbolrplD 
ID1168115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp246568 
End bp247173 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID637342239 
Product50S ribosomal protein L4 
Protein accessionNP_715872 
Protein GI24371830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGG TATTGAAAGA CGCGCAAAGC GCTCTTGAAG TTTCCGAAAC TACCTTCGGC 
CGTGACTTTA ACGAGGCACT GGTTCATCAG GTAGTTGTAG CATACGCTGC AAACGCGCGT 
CAGGGCACTC GTGCTCAAAA GACTCGTGCG GAAGTAACTG GCTCTGGCAA AAAGCCATGG 
CGCCAAAAAG GCACTGGCCG CGCTCGTGCG GGTGGTGTTA AGGGCCCAAT CTGGCGTGGC 
GGTGGCGTAA CTTTCGCTGC TAAAACTCAA GATCACAGCC AAAAAGTAAA CAAGAAGATG 
TACCGCGGCG CGCTGAAAAG CATTCTGTCT GAGCTGGTAC GTCAAGACCG TCTGGTGGTT 
GTTGAATCAT TCAGCGTTGA AGCTCCTAAA ACTAAAGAGC TGAAAGCTAA ACTGAAAGCA 
ATGAACTTAG AAGACGTGTT AATTGTGACT TCAGAAGTTG ACGAGAATTT ATTCTTAGCA 
GCTCGCAACC TGTACAAGGT TGACGTTCGT GACGTTGCGG GTCTAGACCC AGTAAGTCTA 
ATCGCGTTCA ACACAGTGCT TGTGACTGCT GATGCAGTTA AGCAAATCGA GGAGATGCTA 
GCATGA
 
Protein sequence
MELVLKDAQS ALEVSETTFG RDFNEALVHQ VVVAYAANAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARA GGVKGPIWRG GGVTFAAKTQ DHSQKVNKKM YRGALKSILS ELVRQDRLVV 
VESFSVEAPK TKELKAKLKA MNLEDVLIVT SEVDENLFLA ARNLYKVDVR DVAGLDPVSL 
IAFNTVLVTA DAVKQIEEML A